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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G16780
Type: Protein GRN ID: np29596 Name:
Annotation: Ribosomal protein L19e family protein
Gene Locus: AT3G16780
Gene Expression (Affy ATH1 probeset): 258410_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060
3 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770
4 AT3G16780  --  has similar expression pattern (mutual information value=0.952202) with  --  AT1G20220
5 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10
6 AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5
7 AT3G16780  --  has similar expression pattern (mutual information value=0.887772) with  --  ATTCP-1; TCP-1
8 AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT4G21460
9 AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT3G18240
10 AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080
11 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480
12 AT3G16780  --  has similar expression pattern (mutual information value=0.84192) with  --  AT4G25890
13 AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57
14 AT3G16780  --  has similar expression pattern (mutual information value=0.994185) with  --  AT5G08180
15 AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210
16 AT3G16780  --  has similar expression pattern (mutual information value=0.995608) with  --  AT5G59240
17 AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330
18 AT3G16780  --  has similar expression pattern (mutual information value=0.939468) with  --  AT5G16070
19 AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680
20 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520
21 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.822822) with  --  AT2G33840
22 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.822822) with  --  AT1G28350
23 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.05641) with  --  AT2G39390
24 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.829737) with  --  AT2G27730
25 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0274) with  --  AT1G08580
26 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.02684) with  --  AT2G25210
27 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.875633) with  --  AtTRM82; TRM82
28 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.29902) with  --  AT1G64880
29 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.20654) with  --  AT1G73940
30 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.864763) with  --  AT1G77750
31 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.03676) with  --  AT3G03960
32 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G08520
33 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT2G40205
34 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G56020
35 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G11120
36 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.11077) with  --  AT3G12390
37 AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.09616) with  --  NFD1
38 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.03164) with  --  AT2G18520
39 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.913492) with  --  AT2G40430
40 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.962648) with  --  AT1G13160
41 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.961877) with  --  ATKRS-1
42 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.22987) with  --  AT3G22660
43 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.973767) with  --  AT4G22000
44 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.014) with  --  AT4G27090
45 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.03488) with  --  AT4G31810
46 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.13253) with  --  emb2474; TIM9
47 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.01708) with  --  NACA3
48 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.801675) with  --  AT5G23540
49 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.80981) with  --  AT5G56500
50 AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.15281) with  --  PNM1
51 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.12237) with  --  AT2G34357
52 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.03897) with  --  AT2G20710
53 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.03238) with  --  AT1G09590
54 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.03238) with  --  AT1G09690
55 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=0.976256) with  --  AT3G10090
56 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.12693) with  --  AT4G25730
57 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=0.818932) with  --  EMB3012
58 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.15884) with  --  GR-RBP3
59 AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.05168) with  --  AT5G19300
60 AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5  --  has similar expression pattern (mutual information value=0.868947) with  --  AT3G01160
61 AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5  --  has similar expression pattern (mutual information value=0.827342) with  --  AT1G66530
62 AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5  --  has similar expression pattern (mutual information value=0.931681) with  --  AtLa1; La1
63 AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5  --  has similar expression pattern (mutual information value=0.828994) with  --  AT5G26710
64 AT3G16780  --  has similar expression pattern (mutual information value=0.887772) with  --  ATTCP-1; TCP-1  --  interacts with  --  COP1
65 AT3G16780  --  has similar expression pattern (mutual information value=0.887772) with  --  ATTCP-1; TCP-1  --  has similar expression pattern (mutual information value=0.956966) with  --  TOM40
66 AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT3G18240  --  is modified by  --  CDPK6
67 AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080  --  has similar expression pattern (mutual information value=0.967864) with  --  AT2G21440
68 AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080  --  has similar expression pattern (mutual information value=0.923653) with  --  AT3G02760
69 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  interacts with  --  AT5G50840
70 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  interacts with  --  AT2G42395
71 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.978014) with  --  AT2G40660
72 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.12489) with  --  HTA8
73 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.17772) with  --  AT3G16080
74 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.997183) with  --  AT1G48830
75 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G34555
76 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.900863) with  --  ATHD2A; HD2A; HDA3; HDT1
77 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.31307) with  --  AT3G60245
78 AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.931991) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
79 AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  interacts with  --  ATPOT1; AtPOT1a
80 AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  has similar expression pattern (mutual information value=0.946314) with  --  ATPRMT4B; PRMT4B
81 AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  has similar expression pattern (mutual information value=0.820723) with  --  OLI2
82 AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210  --  has similar expression pattern (mutual information value=0.853227) with  --  AT3G52170
83 AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210  --  has similar expression pattern (mutual information value=1.52465) with  --  AT4G17520
84 AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210  --  interacts with  --  CERK1; LYSM RLK1
85 AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
86 AT3G16780  --  has similar expression pattern (mutual information value=0.995608) with  --  AT5G59240  --  has similar expression pattern (mutual information value=0.82281) with  --  AT1G23410
87 AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.89627) with  --  ATCXXS1; CXXS1
88 AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.833698) with  --  AT1G55000
89 AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.884269) with  --  AT5G33300
90 AT3G16780  --  has similar expression pattern (mutual information value=0.939468) with  --  AT5G16070  --  interacts with  --  AHK4
91 AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680  --  interacts with  --  LSU2
92 AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680  --  has similar expression pattern (mutual information value=0.800036) with  --  EMB2777
93 AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680  --  has similar expression pattern (mutual information value=0.930568) with  --  AT1G71850
94 AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680  --  has similar expression pattern (mutual information value=0.848601) with  --  AT5G11240
95 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520  --  has similar expression pattern (mutual information value=0.900098) with  --  ATORC1B; ORC1B; UNE13
96 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520  --  has similar expression pattern (mutual information value=0.900098) with  --  ATORC1A; ORC1A
97 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520  --  has similar expression pattern (mutual information value=0.801514) with  --  AKR4C11
98 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520  --  has similar expression pattern (mutual information value=0.825545) with  --  AT5G07810
99 AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520  --  has product (in catalytic reaction)  --  Leukotriene B4
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