Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G50840
Type: Protein GRN ID: np42364 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G50840
Gene Expression (Affy ATH1 probeset): 248471_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G50840  --  interacts with  --  AT5G61330
3 AT5G50840  --  interacts with  --  ATTBP3; ATTRB2; TBP3; TRB2
4 AT5G50840  --  interacts with  --  AT5G22310
5 AT5G50840  --  interacts with  --  AT1G58070
6 AT5G50840  --  interacts with  --  AT1G62520
7 AT5G50840  --  interacts with  --  AT3G12390
8 AT5G50840  --  interacts with  --  AT3G19520
9 AT5G50840  --  interacts with  --  AT3G60660
10 AT5G50840  --  interacts with  --  NACA2
11 AT5G50840  --  interacts with  --  AT4G10480
12 AT5G50840  --  interacts with  --  AT5G61330  --  interacts with  --  AT1G07840
13 AT5G50840  --  interacts with  --  AT5G61330  --  interacts with  --  AT5G58720
14 AT5G50840  --  interacts with  --  ATTBP3; ATTRB2; TBP3; TRB2  --  interacts with  --  AT5G66000
15 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT5G58950
16 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT4G27460
17 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT2G45920
18 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT3G01690
19 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT1G01630
20 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT3G27960
21 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  ATEXO70H1; EXO70H1
22 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  CIPK9; PKS6; SnRK3.12
23 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  ATGSK1; ATSK2-3; ATSK22; BIL2; GSK1; SK22
24 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT4G23680
25 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT1G54770
26 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT1G12650
27 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  PAD1
28 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  BRX
29 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT4G33690
30 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  ATPUB29; PUB29
31 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT1G30860
32 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  PKP-ALPHA; PKP1
33 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  ATSK41; SK41
34 AT5G50840  --  interacts with  --  AT5G22310  --  interacts with  --  AT5G02870
35 AT5G50840  --  interacts with  --  AT5G22310  --  has similar expression pattern (mutual information value=0.830541) with  --  AT3G12710
36 AT5G50840  --  interacts with  --  AT1G58070  --  interacts with  --  ATRBL2; RBL2
37 AT5G50840  --  interacts with  --  AT1G58070  --  interacts with  --  AT5G13810
38 AT5G50840  --  interacts with  --  AT1G58070  --  interacts with  --  ASIL1
39 AT5G50840  --  interacts with  --  AT1G58070  --  has similar expression pattern (mutual information value=1.06302) with  --  TED6
40 AT5G50840  --  interacts with  --  AT1G58070  --  has similar expression pattern (mutual information value=1.07337) with  --  AtDMP2; DMP2
41 AT5G50840  --  interacts with  --  AT1G58070  --  has similar expression pattern (mutual information value=0.900553) with  --  AtENODL9; ENODL9
42 AT5G50840  --  interacts with  --  AT1G58070  --  has similar expression pattern (mutual information value=0.961263) with  --  APX5
43 AT5G50840  --  interacts with  --  AT1G58070  --  has similar expression pattern (mutual information value=1.15958) with  --  ATLAC17; LAC17
44 AT5G50840  --  interacts with  --  AT1G62520  --  interacts with  --  AT5G41350
45 AT5G50840  --  interacts with  --  AT3G12390  --  interacts with  --  AT2G42395
46 AT5G50840  --  interacts with  --  AT3G12390  --  interacts with  --  MLP329; ZCE2
47 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.11077) with  --  AT2G32060
48 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.978244) with  --  AT1G60770
49 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.08865) with  --  AT1G64880
50 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.920369) with  --  ATPRMT10; PRMT10
51 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.97433) with  --  NFD5
52 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.06023) with  --  AT1G73940
53 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.05156) with  --  ATTCP-1; TCP-1
54 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.958728) with  --  emb2474; TIM9
55 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.90394) with  --  AT3G52040
56 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.0373) with  --  NACA3
57 AT5G50840  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.02989) with  --  AT5G47210
58 AT5G50840  --  interacts with  --  AT3G19520  --  interacts with  --  AT1G22630
59 AT5G50840  --  interacts with  --  AT3G19520  --  is the target gene of  --  ath-miR779.2
60 AT5G50840  --  interacts with  --  AT3G19520  --  is modified by  --  MPK16
61 AT5G50840  --  interacts with  --  NACA2  --  interacts with  --  CERK1; LYSM RLK1
62 AT5G50840  --  interacts with  --  NACA2  --  has similar expression pattern (mutual information value=0.936824) with  --  scpl42
63 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.894615) with  --  ATPRMT1A; PRMT1A
64 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.978014) with  --  AT2G40660
65 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.926122) with  --  AT2G20710
66 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.986344) with  --  AT2G40430
67 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.12489) with  --  HTA8
68 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.16609) with  --  AT3G10090
69 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.00694) with  --  AT3G16780
70 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.17772) with  --  AT3G16080
71 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.997183) with  --  AT1G48830
72 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.878382) with  --  AtLa1; La1
73 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G34555
74 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.900863) with  --  ATHD2A; HD2A; HDA3; HDT1
75 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.31307) with  --  AT3G60245
76 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.931991) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
77 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.809763) with  --  AT5G56500
78 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.91551) with  --  AT5G13520
79 AT5G50840  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.99028) with  --  AT4G17390
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact