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Location:  Home > Details for node AT5G23250
Type: Protein GRN ID: np39190 Name:
Annotation: Succinyl-CoA ligase, alpha subunit [EC:6.2.1.4] [EC:6.2.1.5]
Gene Locus: AT5G23250
Gene Expression (Affy ATH1 probeset): 249828_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G23250  --  has product (in catalytic reaction)  --  Succinyl-CoA
3 AT5G23250  --  has product (in catalytic reaction)  --  GDP
4 AT5G23250  --  is the target gene of  --  ath-miR171c
5 AT5G23250  --  is the target gene of  --  ath-miR171b
6 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A
7 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620
8 AT5G23250  --  has similar expression pattern (mutual information value=0.843516) with  --  AT4G26210
9 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850
10 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1
11 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5
12 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050
13 AT5G23250  --  has similar expression pattern (mutual information value=0.824748) with  --  AT5G06550
14 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440
15 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1
16 AT5G23250  --  has product (in catalytic reaction)  --  Succinyl-CoA  --  is product (in catalytic reaction) of  --  GTP
17 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ADSS
18 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  IMP
19 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ADL3; CF1; DL3; DRP2B
20 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ADL6; DRP2A
21 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  VTC5
22 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  VTC2
23 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  AGK2; GK-2
24 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  GMP
25 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  AT3G06200
26 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  AGK1; GK-1
27 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  AT1G78800
28 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  GDP-mannose
29 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ATFUT11; FUCT1; FUCTA; FUT11
30 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  GDP-L-fucose
31 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ATFUT12; FUCT2; FUCTB; FUT12
32 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  AT1G16570
33 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  N,N'-Diacetylchitobiosyldiphosphodolichol
34 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  LEW3
35 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  DPMS1
36 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ATCSLA02; ATCSLA2; CSLA02; CSLA2
37 AT5G23250  --  has product (in catalytic reaction)  --  GDP  --  is product (in catalytic reaction) of  --  ATCSLA09; ATCSLA9; CSLA09; CSLA9; RAT4
38 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  PXY
39 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  ATHAM3; HAM3; LOM3
40 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  ATHAM2; HAM2; LOM2
41 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  AT3G47170
42 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  AT3G43156
43 AT5G23250  --  is the target gene of  --  ath-miR171c  --  inhibit the expression of  --  ATHAM1; HAM1; LOM1
44 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  interacts with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
45 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.917406) with  --  AT2G44120
46 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=1.24137) with  --  PPR596
47 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.952707) with  --  HSP60-3A
48 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.936025) with  --  ATPRMT3; PRMT3
49 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.894615) with  --  AT4G10480
50 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.813264) with  --  AT4G24830
51 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.977605) with  --  ROC2
52 AT5G23250  --  has similar expression pattern (mutual information value=0.874551) with  --  ATPRMT1A; PRMT1A  --  has similar expression pattern (mutual information value=0.906986) with  --  AT5G03850
53 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.927991) with  --  AT2G34260
54 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.14124) with  --  AT1G23100
55 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.885415) with  --  AT1G04480
56 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.928775) with  --  AT1G53645
57 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.108) with  --  AT1G73940
58 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.968252) with  --  AT3G10530
59 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.25145) with  --  AT3G03060
60 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.811658) with  --  AT3G09890
61 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.0778) with  --  ATPHB4; PHB4
62 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.42589) with  --  AT4G31810
63 AT5G23250  --  has similar expression pattern (mutual information value=0.883533) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.17324) with  --  emb2474; TIM9
64 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850  --  has similar expression pattern (mutual information value=1.11772) with  --  AT2G20060
65 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850  --  has similar expression pattern (mutual information value=1.01652) with  --  DECOY
66 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850  --  has similar expression pattern (mutual information value=1.11502) with  --  TOM40
67 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850  --  has similar expression pattern (mutual information value=1.04026) with  --  AT5G35530
68 AT5G23250  --  has similar expression pattern (mutual information value=0.834002) with  --  AT4G35850  --  interacts with  --  AT1G26460
69 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.11364) with  --  AT3G06530
70 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.97061) with  --  AT3G21540
71 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.0499) with  --  AT3G12860
72 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.963526) with  --  AT3G23940
73 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.04337) with  --  AT4G04940
74 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.22731) with  --  RPS6; RPS6A
75 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.860435) with  --  AT4G34555
76 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.845533) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
77 AT5G23250  --  has similar expression pattern (mutual information value=0.862432) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.02599) with  --  AT4G15640
78 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has similar expression pattern (mutual information value=0.837186) with  --  AT2G35040
79 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has similar expression pattern (mutual information value=1.22542) with  --  NOP56
80 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has similar expression pattern (mutual information value=0.885583) with  --  AT1G63810
81 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has similar expression pattern (mutual information value=0.969513) with  --  GYRA
82 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has similar expression pattern (mutual information value=1.01443) with  --  AT3G15460
83 AT5G23250  --  has similar expression pattern (mutual information value=0.840632) with  --  ATPURM; EMB2818; PUR5  --  has product (in catalytic reaction)  --  Aminoimidazole ribotide
84 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  interacts with  --  CERK1; LYSM RLK1
85 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
86 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  interacts with  --  AT3G07500
87 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  interacts with  --  CIPK22; SnRK3.19
88 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.887961) with  --  AT2G44860
89 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.844128) with  --  EMB2785
90 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.90799) with  --  NFD6
91 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.895368) with  --  AT1G14060
92 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.945331) with  --  AT1G80720
93 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.811247) with  --  AT3G01800
94 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.96636) with  --  AR192
95 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=1.12762) with  --  AT4G28450
96 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=1.09354) with  --  RBL
97 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=1.00593) with  --  AT5G11240
98 AT5G23250  --  has similar expression pattern (mutual information value=0.864283) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.974306) with  --  RID2
99 AT5G23250  --  has similar expression pattern (mutual information value=0.824748) with  --  AT5G06550  --  has similar expression pattern (mutual information value=0.887554) with  --  PPR336
100 AT5G23250  --  has similar expression pattern (mutual information value=0.824748) with  --  AT5G06550  --  has similar expression pattern (mutual information value=0.94878) with  --  AT1G71850
101 AT5G23250  --  has similar expression pattern (mutual information value=0.824748) with  --  AT5G06550  --  has similar expression pattern (mutual information value=0.837249) with  --  AT4G31790
102 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.848281) with  --  AT1G79470
103 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.857591) with  --  HSP60; HSP60-3B
104 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.05455) with  --  AT2G25210
105 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.04592) with  --  AT2G31725
106 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.923102) with  --  AT1G23280
107 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.814196) with  --  AT1G01940
108 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.839603) with  --  AT1G06720
109 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.816413) with  --  AT1G73180
110 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.173) with  --  AT3G10090
111 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.15374) with  --  AT3G06700
112 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.813809) with  --  AT3G06680
113 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.10756) with  --  AT3G22660
114 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.35766) with  --  AT4G05400
115 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.08373) with  --  NFD1
116 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.850719) with  --  AT4G31985
117 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.02641) with  --  AT3G57000
118 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.17287) with  --  PNM1
119 AT5G23250  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G62440  --  interacts with  --  ARR5
120 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.807038) with  --  AT1G24310
121 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.13915) with  --  AT1G80750
122 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.08254) with  --  RPL10; RPL10A; SAC52
123 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.30559) with  --  AT3G05560
124 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.916323) with  --  RPSAb
125 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.18063) with  --  AT3G11250
126 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.986114) with  --  MEE49
127 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.82366) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
128 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.09309) with  --  EMB1080
129 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.12437) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
130 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.31532) with  --  PYRD
131 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.950364) with  --  DegP9
132 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.23271) with  --  ATPHB3; PHB3
133 AT5G23250  --  has similar expression pattern (mutual information value=0.848149) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.1919) with  --  AT5G52650
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