Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G42395
Type: Protein GRN ID: np20472 Name:
Annotation: unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Gene Locus: AT2G42395
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G42395  --  interacts with  --  AT3G12390
3 AT2G42395  --  interacts with  --  AT4G10480
4 AT2G42395  --  interacts with  --  NACA2
5 AT2G42395  --  interacts with  --  NACA5
6 AT2G42395  --  interacts with  --  AT3G12390  --  interacts with  --  AT5G50840
7 AT2G42395  --  interacts with  --  AT3G12390  --  interacts with  --  MLP329; ZCE2
8 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.11077) with  --  AT2G32060
9 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.978244) with  --  AT1G60770
10 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.08865) with  --  AT1G64880
11 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.920369) with  --  ATPRMT10; PRMT10
12 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.97433) with  --  NFD5
13 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.06023) with  --  AT1G73940
14 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.05156) with  --  ATTCP-1; TCP-1
15 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.958728) with  --  emb2474; TIM9
16 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=0.90394) with  --  AT3G52040
17 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.0373) with  --  NACA3
18 AT2G42395  --  interacts with  --  AT3G12390  --  has similar expression pattern (mutual information value=1.02989) with  --  AT5G47210
19 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.894615) with  --  ATPRMT1A; PRMT1A
20 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.978014) with  --  AT2G40660
21 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.926122) with  --  AT2G20710
22 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.986344) with  --  AT2G40430
23 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.12489) with  --  HTA8
24 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.16609) with  --  AT3G10090
25 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.00694) with  --  AT3G16780
26 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.17772) with  --  AT3G16080
27 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.997183) with  --  AT1G48830
28 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.878382) with  --  AtLa1; La1
29 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G34555
30 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.900863) with  --  ATHD2A; HD2A; HDA3; HDT1
31 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.31307) with  --  AT3G60245
32 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.931991) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
33 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.809763) with  --  AT5G56500
34 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.91551) with  --  AT5G13520
35 AT2G42395  --  interacts with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.99028) with  --  AT4G17390
36 AT2G42395  --  interacts with  --  NACA2  --  interacts with  --  CERK1; LYSM RLK1
37 AT2G42395  --  interacts with  --  NACA2  --  has similar expression pattern (mutual information value=0.936824) with  --  scpl42
38 AT2G42395  --  interacts with  --  NACA5  --  interacts with  --  AT5G12190
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab