Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G53645
Type: Protein GRN ID: np16317 Name:
Annotation: hydroxyproline-rich glycoprotein family protein
Gene Locus: AT1G53645
Gene Expression (Affy ATH1 probeset): 260984_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596
3 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920
4 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650
5 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3
6 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940
7 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620
8 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810
9 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1
10 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050
11 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  interacts with  --  AT3G27960
12 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.15308) with  --  AT2G05140
13 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.15308) with  --  AT2G37690
14 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.24137) with  --  ATPRMT1A; PRMT1A
15 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.866769) with  --  EMB2785
16 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.11767) with  --  AT2G37990
17 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.920222) with  --  AT2G20060
18 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.04902) with  --  AT2G18330
19 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.887703) with  --  TPR3
20 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.839808) with  --  PPR336
21 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.34764) with  --  AT1G79150
22 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.08863) with  --  AT2G28600
23 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.881748) with  --  ATPHB6; PHB6
24 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.881748) with  --  ATPHB1; PHB1
25 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.904351) with  --  AT1G23280
26 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.07908) with  --  AT1G18850
27 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.16224) with  --  AT1G77550
28 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.03291) with  --  AT3G10530
29 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.10821) with  --  AT3G06530
30 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.893942) with  --  AT3G13940
31 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.07123) with  --  TOM40
32 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.941405) with  --  AR192
33 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.09242) with  --  AT4G28450
34 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.00973) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
35 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.06259) with  --  ATPRMT5; PRMT5; SKB1
36 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.991694) with  --  AT3G55605
37 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.05031) with  --  AT5G06550
38 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=0.954326) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
39 AT1G53645  --  has similar expression pattern (mutual information value=0.955257) with  --  PPR596  --  has similar expression pattern (mutual information value=1.1458) with  --  AT2G39795
40 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  interacts with  --  ATCSP3; CSP3
41 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.916306) with  --  AT2G44120
42 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.896423) with  --  AML1; ATRPS5A; RPS5A
43 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.916427) with  --  CPN10
44 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=1.00923) with  --  AT1G63660
45 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=1.17573) with  --  AT1G52930
46 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=1.02264) with  --  ATPHB4; PHB4
47 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.959846) with  --  MEE49
48 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.955516) with  --  AT3G58700
49 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.800418) with  --  RER1
50 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=0.881774) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
51 AT1G53645  --  has similar expression pattern (mutual information value=0.892452) with  --  AT3G03920  --  has similar expression pattern (mutual information value=1.05137) with  --  ATEBP1; ATG2; EBP1
52 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.959608) with  --  MEE67
53 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.959608) with  --  AT1G18320
54 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.812718) with  --  AT1G04900
55 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.857657) with  --  AT1G73940
56 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.838725) with  --  AT1G73180
57 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.820091) with  --  ATPURC; PUR7; PURC
58 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.945294) with  --  AT4G05400
59 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.810805) with  --  AT4G11120
60 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.895224) with  --  PNM1
61 AT1G53645  --  has similar expression pattern (mutual information value=1.04475) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.92797) with  --  AT5G27395
62 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.00178) with  --  ATRRP4; RRP4
63 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.826816) with  --  AtELP2; ELP2
64 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.809328) with  --  NRPA2
65 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.04903) with  --  AAC42; ATRPAC42
66 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.05777) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
67 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.09528) with  --  HSP60-3A
68 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.931773) with  --  EMB2788
69 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.975188) with  --  NRPA1
70 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.841361) with  --  ATMSL10; MSL10
71 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.882124) with  --  AT5G14580
72 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.941088) with  --  RID2
73 AT1G53645  --  has similar expression pattern (mutual information value=0.913109) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.962744) with  --  TOZ
74 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.09419) with  --  AT2G34260
75 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.904862) with  --  AT1G63250
76 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.904862) with  --  AT2G07750
77 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.10522) with  --  AT1G51380
78 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.987182) with  --  AT3G07750
79 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.834291) with  --  AT3G19440
80 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.16727) with  --  RBL
81 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.995828) with  --  ATRH25; STRS2
82 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.956394) with  --  AT5G09840
83 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.15196) with  --  AT5G11240
84 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.810456) with  --  AT5G39840
85 AT1G53645  --  has similar expression pattern (mutual information value=0.982265) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.00565) with  --  AT5G16930
86 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.14124) with  --  AT1G23100
87 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.885415) with  --  AT1G04480
88 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.25145) with  --  AT3G03060
89 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.811658) with  --  AT3G09890
90 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.817188) with  --  AT4G26210
91 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=1.17324) with  --  emb2474; TIM9
92 AT1G53645  --  has similar expression pattern (mutual information value=0.928775) with  --  AT4G23620  --  has similar expression pattern (mutual information value=0.883533) with  --  AT5G23250
93 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.800439) with  --  SCPL8; SNG1
94 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.03488) with  --  AT1G60770
95 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.14627) with  --  AT1G79470
96 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.874947) with  --  HCC1
97 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.84347) with  --  ATPRMT4B; PRMT4B
98 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.1071) with  --  NFD1
99 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.809487) with  --  AT5G23540
100 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.817262) with  --  COX15
101 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.11498) with  --  GR-RBP3
102 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.818734) with  --  RPN5B
103 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.946321) with  --  LON1; LON_ARA_ARA
104 AT1G53645  --  has similar expression pattern (mutual information value=0.883803) with  --  AT4G31810  --  has product (in catalytic reaction)  --  3-Hydroxy-2-methylpropanoate
105 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.963526) with  --  AT3G23940
106 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.900863) with  --  AT4G10480
107 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.849395) with  --  AT4G24830
108 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.22731) with  --  RPS6; RPS6A
109 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.860435) with  --  AT4G34555
110 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.32732) with  --  ATPURM; EMB2818; PUR5
111 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.04887) with  --  ROC2
112 AT1G53645  --  has similar expression pattern (mutual information value=0.894526) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.02599) with  --  AT4G15640
113 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  interacts with  --  CERK1; LYSM RLK1
114 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
115 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  interacts with  --  AT3G07500
116 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  interacts with  --  CIPK22; SnRK3.19
117 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.887961) with  --  AT2G44860
118 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.90799) with  --  NFD6
119 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.895368) with  --  AT1G14060
120 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.945331) with  --  AT1G80720
121 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.811247) with  --  AT3G01800
122 AT1G53645  --  has similar expression pattern (mutual information value=0.981425) with  --  AT5G02050  --  has similar expression pattern (mutual information value=0.898559) with  --  AT4G35850
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact