Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node LSD1
Type: Protein GRN ID: np35606 Name: LSD1
Annotation: LSD1 | LSD1 zinc finger family protein
Gene Locus: AT4G20380
Transcription factor /
transcriptional regulator:		 transcription factor family Znf-LSD
Gene Expression (Affy ATH1 probeset): 254477_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LSD1  --  interacts with  --  AtGILP; GILP
3 LSD1  --  interacts with  --  ATBZIP10; BZO2H1
4 LSD1  --  interacts with  --  ATCAT3; CAT3; SEN2
5 LSD1  --  interacts with  --  CAT2
6 LSD1  --  interacts with  --  CAT1
7 LSD1  --  interacts with  --  NDL1
8 LSD1  --  interacts with  --  AtGILP; GILP  --  interacts with  --  ATSYP23; SYP23
9 LSD1  --  interacts with  --  AtGILP; GILP  --  has similar expression pattern (mutual information value=0.811168) with  --  AT1G19020
10 LSD1  --  interacts with  --  AtGILP; GILP  --  has similar expression pattern (mutual information value=0.867199) with  --  AtNUDT7; GFG1; NUDT7
11 LSD1  --  interacts with  --  AtGILP; GILP  --  has similar expression pattern (mutual information value=0.833989) with  --  AT4G34150
12 LSD1  --  interacts with  --  AtGILP; GILP  --  has similar expression pattern (mutual information value=0.883794) with  --  ATSYP122; SYP122
13 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ATBZIP9; BZIP9; BZO2H2
14 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  AtbZIP63; BZO2H3
15 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ATBZIP25; BZIP25; BZO2H4
16 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ATBZIP53; BZIP53
17 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  AtbZIP44; bZIP44
18 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
19 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ATBZIP2; bZIP2; GBF5
20 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  AtbZIP1; bZIP1
21 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ABI3
22 LSD1  --  interacts with  --  ATBZIP10; BZO2H1  --  interacts with  --  ARR18
23 LSD1  --  interacts with  --  ATCAT3; CAT3; SEN2  --  interacts with  --  NDPK1
24 LSD1  --  interacts with  --  ATCAT3; CAT3; SEN2  --  is regulated by  --  ATWRKY53
25 LSD1  --  interacts with  --  ATCAT3; CAT3; SEN2  --  is regulated by  --  AtCCA1; CCA1
26 LSD1  --  interacts with  --  ATCAT3; CAT3; SEN2  --  is regulated by  --  LHY; LHY1
27 LSD1  --  interacts with  --  CAT2  --  interacts with  --  AT3G54360
28 LSD1  --  interacts with  --  CAT2  --  is regulated by  --  GBF1
29 LSD1  --  interacts with  --  CAT1  --  interacts with  --  ATPUB49; PUB49
30 LSD1  --  interacts with  --  CAT1  --  interacts with  --  DMS3; IDN1
31 LSD1  --  interacts with  --  CAT1  --  interacts with  --  ATPEX5; EMB2790; PEX5
32 LSD1  --  interacts with  --  CAT1  --  has similar expression pattern (mutual information value=0.857614) with  --  AXR3
33 LSD1  --  interacts with  --  CAT1  --  has similar expression pattern (mutual information value=1.06573) with  --  AT1G65010
34 LSD1  --  interacts with  --  CAT1  --  has similar expression pattern (mutual information value=0.803805) with  --  AT5G39320
35 LSD1  --  interacts with  --  NDL1  --  interacts with  --  YAB2
36 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G10740
37 LSD1  --  interacts with  --  NDL1  --  interacts with  --  PAB1
38 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G22970
39 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ANNAT1; ATOXY5; OXY5
40 LSD1  --  interacts with  --  NDL1  --  interacts with  --  TUA2
41 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATSPPL2; SPPL2
42 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G72900
43 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G72920
44 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G75420
45 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT1G79510
46 LSD1  --  interacts with  --  NDL1  --  interacts with  --  KCS9
47 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ROC3
48 LSD1  --  interacts with  --  NDL1  --  interacts with  --  SLP3
49 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ALDH11A3
50 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT2G24420
51 LSD1  --  interacts with  --  NDL1  --  interacts with  --  CKS2
52 LSD1  --  interacts with  --  NDL1  --  interacts with  --  TIM10
53 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ADS2; DS2
54 LSD1  --  interacts with  --  NDL1  --  interacts with  --  SLT1
55 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATPI4K GAMMA 4; PI4K GAMMA 4; UBDK GAMMA 4
56 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATBCA1; ATSABP3; CA1; SABP3
57 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT3G04840
58 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATMT-1; ATMT-K; MT2A
59 LSD1  --  interacts with  --  NDL1  --  interacts with  --  EIF4A-III
60 LSD1  --  interacts with  --  NDL1  --  interacts with  --  PDF1; PP2AA2; PR 65
61 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATLOX2
62 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AtPPa4; PPa4
63 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ARS27A; RS27A
64 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT3G62460
65 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATXT1; XT1; XXT1
66 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G10840
67 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATCYS-3A; CYTACS1; OASA1; OLD3
68 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G16240
69 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G16450
70 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G16500
71 LSD1  --  interacts with  --  NDL1  --  interacts with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
72 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G29780
73 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G38550
74 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G38690
75 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT4G40030
76 LSD1  --  interacts with  --  NDL1  --  interacts with  --  IDH-V
77 LSD1  --  interacts with  --  NDL1  --  interacts with  --  BPA1
78 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ATCIMS; ATMETS; ATMS1
79 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT5G24710
80 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT5G24740
81 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT5G25100
82 LSD1  --  interacts with  --  NDL1  --  interacts with  --  ADH2; ATGSNOR1; GSNOR; HOT5; PAR2
83 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT5G46780
84 LSD1  --  interacts with  --  NDL1  --  interacts with  --  BOB1
85 LSD1  --  interacts with  --  NDL1  --  interacts with  --  XBAT32
86 LSD1  --  interacts with  --  NDL1  --  interacts with  --  COB
87 LSD1  --  interacts with  --  NDL1  --  interacts with  --  AT5G63370
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact