Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G22970
Type: Protein GRN ID: np12977 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Gene Locus: AT1G22970
Gene Expression (Affy ATH1 probeset): 264722_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G22970  --  interacts with  --  NDL1
3 AT1G22970  --  has similar expression pattern (mutual information value=0.81828) with  --  AT1G14300
4 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945
5 AT1G22970  --  has similar expression pattern (mutual information value=0.817817) with  --  AT3G56510
6 AT1G22970  --  has similar expression pattern (mutual information value=0.872385) with  --  AT5G14105
7 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  YAB2
8 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT1G10740
9 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  PAB1
10 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ANNAT1; ATOXY5; OXY5
11 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  TUA2
12 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATSPPL2; SPPL2
13 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT1G72900
14 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT1G72920
15 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT1G75420
16 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT1G79510
17 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  KCS9
18 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ROC3
19 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  SLP3
20 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ALDH11A3
21 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT2G24420
22 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  CKS2
23 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  TIM10
24 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ADS2; DS2
25 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  SLT1
26 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATPI4K GAMMA 4; PI4K GAMMA 4; UBDK GAMMA 4
27 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATBCA1; ATSABP3; CA1; SABP3
28 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT3G04840
29 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATMT-1; ATMT-K; MT2A
30 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  EIF4A-III
31 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  PDF1; PP2AA2; PR 65
32 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATLOX2
33 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AtPPa4; PPa4
34 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ARS27A; RS27A
35 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT3G62460
36 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATXT1; XT1; XXT1
37 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G10840
38 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATCYS-3A; CYTACS1; OASA1; OLD3
39 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G16240
40 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G16450
41 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G16500
42 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
43 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  LSD1
44 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G29780
45 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G38550
46 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G38690
47 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT4G40030
48 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  IDH-V
49 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  BPA1
50 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATCIMS; ATMETS; ATMS1
51 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT5G24710
52 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT5G24740
53 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT5G25100
54 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ADH2; ATGSNOR1; GSNOR; HOT5; PAR2
55 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT5G46780
56 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  BOB1
57 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  XBAT32
58 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  COB
59 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  AT5G63370
60 AT1G22970  --  interacts with  --  NDL1  --  interacts with  --  ATSYP23; SYP23
61 AT1G22970  --  has similar expression pattern (mutual information value=0.81828) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.857537) with  --  ROL5
62 AT1G22970  --  has similar expression pattern (mutual information value=0.81828) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.964484) with  --  AT3G07750
63 AT1G22970  --  has similar expression pattern (mutual information value=0.81828) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.940031) with  --  AT3G05810
64 AT1G22970  --  has similar expression pattern (mutual information value=0.81828) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.903571) with  --  RPL3P
65 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.917725) with  --  AT2G20940
66 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42
67 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.83929) with  --  AT1G13810
68 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380
69 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940
70 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380
71 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450
72 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.834642) with  --  NRPB12; NRPD12; NRPE12
73 AT1G22970  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G04945  --  has similar expression pattern (mutual information value=0.938188) with  --  AT5G64680
74 AT1G22970  --  has similar expression pattern (mutual information value=0.817817) with  --  AT3G56510  --  has similar expression pattern (mutual information value=0.812953) with  --  AT2G03780
75 AT1G22970  --  has similar expression pattern (mutual information value=0.817817) with  --  AT3G56510  --  has similar expression pattern (mutual information value=0.818044) with  --  AT1G07830
76 AT1G22970  --  has similar expression pattern (mutual information value=0.817817) with  --  AT3G56510  --  has similar expression pattern (mutual information value=0.83362) with  --  AT4G19610
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact