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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node SE
Type: Protein GRN ID: np19224 Name: SE
Annotation: SE | C2H2 zinc-finger protein SERRATE (SE)
Gene Locus: AT2G27100
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 266315_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 SE  --  interacts with  --  ABH1
3 SE  --  interacts with  --  ATCBP20
4 SE  --  interacts with  --  RACK1B; RACK1B_AT
5 SE  --  interacts with  --  AtVIP2; VIP2
6 SE  --  interacts with  --  DRB1
7 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1
8 SE  --  interacts with  --  ATCPL1; CPL1; FRY2
9 SE  --  is the target gene of  --  ath-miR863-3p
10 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650
11 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5
12 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200
13 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460
14 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880
15 SE  --  interacts with  --  ABH1  --  interacts with  --  ABI1 family46, coding gene
16 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.842753) with  --  AT2G38420
17 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.832094) with  --  AT5G60430
18 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.832094) with  --  PRORP2
19 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=1.06052) with  --  AT1G15910
20 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=1.06052) with  --  AT4G00380
21 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.821962) with  --  AT3G13190
22 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.993837) with  --  AT4G22000
23 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.980626) with  --  AT3G51270
24 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.8333) with  --  AT5G10950
25 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.917838) with  --  NACA3
26 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=1.04224) with  --  AT5G53800
27 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.95523) with  --  AT1G48900
28 SE  --  interacts with  --  ATCBP20  --  has similar expression pattern (mutual information value=0.872107) with  --  AT5G16950
29 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  interacts with  --  ftsh3
30 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  interacts with  --  ATWNK8; EIP1; WNK8
31 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  interacts with  --  PIRL4
32 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G48650
33 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G43960
34 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.15482) with  --  RPL24A
35 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.846337) with  --  AT1G14810
36 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20648) with  --  AT1G77940
37 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.16573) with  --  AT3G04840
38 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.997471) with  --  AT3G14390
39 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.997471) with  --  AT5G11880
40 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.06694) with  --  CARA; VEN6
41 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.808565) with  --  ATIMPALPHA3; IMPA-3; MOS6
42 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.851738) with  --  AT4G24830
43 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20587) with  --  AT5G58420
44 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.09828) with  --  AT5G60670
45 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.21416) with  --  AT5G61170
46 SE  --  interacts with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.26789) with  --  AT5G16130
47 SE  --  interacts with  --  DRB1  --  interacts with  --  ABI5
48 SE  --  interacts with  --  DRB1  --  interacts with  --  AT5G14370
49 SE  --  interacts with  --  DRB1  --  interacts with  --  HON4
50 SE  --  interacts with  --  DRB1  --  interacts with  --  RD2
51 SE  --  interacts with  --  DRB1  --  interacts with  --  ATVOZ1; VOZ1
52 SE  --  interacts with  --  DRB1  --  interacts with  --  CRM2; HEN1
53 SE  --  interacts with  --  DRB1  --  interacts with  --  ATDCL3; DCL3
54 SE  --  interacts with  --  DRB1  --  interacts with  --  DRB4
55 SE  --  interacts with  --  DRB1  --  interacts with  --  DRB2
56 SE  --  interacts with  --  DRB1  --  interacts with  --  DRB5
57 SE  --  interacts with  --  DRB1  --  interacts with  --  ABCI18; ATNAP4; NAP4
58 SE  --  interacts with  --  DRB1  --  interacts with  --  AGO1
59 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  interacts with  --  ATRAD51D
60 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  interacts with  --  AT1G07705
61 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  interacts with  --  NPR1 /NIM1
62 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  has similar expression pattern (mutual information value=0.893504) with  --  AT1G60900
63 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  has similar expression pattern (mutual information value=0.893504) with  --  AT1G60830
64 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  has similar expression pattern (mutual information value=0.900617) with  --  AT2G47410
65 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  has similar expression pattern (mutual information value=0.955956) with  --  AT1G74250
66 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  has similar expression pattern (mutual information value=0.991476) with  --  CHR11
67 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  is the target gene of  --  ath-miR775
68 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  is the target gene of  --  ath-miR162b
69 SE  --  interacts with  --  ASU1; ATDCL1; CAF; DCL1; EMB60; EMB76; SIN1; SUS1  --  is the target gene of  --  ath-miR162a
70 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT5G53060
71 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ANAC019; NAC019
72 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ATMYB3; MYB3
73 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  XBAT31
74 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT3G54290
75 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT4G28760
76 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT1G20110
77 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT3G26730
78 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  DMS3; IDN1
79 SE  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ATCDPK2/CPK11
80 SE  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  ATMYB66; MYB66; WER; WER1
81 SE  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  ath-miR5026
82 SE  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  AtFAD3; FAD3
83 SE  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  AT1G23410
84 SE  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  AT1G01240
85 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.827551) with  --  AT2G02160
86 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.919108) with  --  AT1G80790
87 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.842803) with  --  ATCYP59; CYP59
88 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.892486) with  --  ATPC2
89 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.931575) with  --  AT3G19650
90 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.856839) with  --  AT5G05210
91 SE  --  has similar expression pattern (mutual information value=0.80471) with  --  AT2G40650  --  has similar expression pattern (mutual information value=0.814935) with  --  TGH
92 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=1.14492) with  --  AT1G60200
93 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.95915) with  --  AT1G15940
94 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.82528) with  --  LD
95 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.825156) with  --  AT4G10930
96 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT5G28330
97 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT5G28390
98 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT3G52660
99 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.937875) with  --  SUA
100 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.823098) with  --  AT5G09880
101 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.912339) with  --  ATXR7; SDG25
102 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.82536) with  --  AT5G44180
103 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.927461) with  --  At-RS41; ATRSP41; RS41
104 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.834796) with  --  ATRAD21.3; SYN4
105 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.989392) with  --  DOT2; MDF
106 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  has similar expression pattern (mutual information value=0.989724) with  --  AT5G17440
107 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  is the target gene of  --  ath-miR5998b
108 SE  --  has similar expression pattern (mutual information value=0.905033) with  --  CHR5  --  is the target gene of  --  ath-miR5998a
109 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  interacts with  --  ATMAP70-5; MAP70-5
110 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.812959) with  --  BRIZ2
111 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.00144) with  --  ATIPT2
112 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.03162) with  --  DRP3B
113 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.835232) with  --  CRWN2; LINC2
114 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.03907) with  --  ATPRP40A; PRP40A
115 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.873758) with  --  ASHH1; ASHH1; SDG26
116 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.80017) with  --  AT1G28060
117 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.992062) with  --  AT3G09360
118 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.03656) with  --  HAT3.1
119 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.00928) with  --  ATPRP40B; PRP40B
120 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.935842) with  --  AT4G39160
121 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.955617) with  --  ATFIP37; FIP37
122 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=0.948263) with  --  ELF9
123 SE  --  has similar expression pattern (mutual information value=0.858294) with  --  AT1G15200  --  has similar expression pattern (mutual information value=1.02474) with  --  AT1G31870
124 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460  --  interacts with  --  AT5G58720
125 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460  --  interacts with  --  BRX
126 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460  --  has similar expression pattern (mutual information value=0.853721) with  --  AT2G34040
127 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460  --  has similar expression pattern (mutual information value=0.839649) with  --  AT5G11760
128 SE  --  has similar expression pattern (mutual information value=0.840686) with  --  AT4G08460  --  is the target gene of  --  ath-miR847
129 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=1.07147) with  --  ATSCC3; SCC3
130 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=1.01583) with  --  AT2G17410
131 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.884046) with  --  AT1G79950
132 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.81569) with  --  GTD1; HAC13; HAF01; HAF1; TAF1
133 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.82313) with  --  CRWN3; LINC3
134 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=1.01782) with  --  AT1G56290
135 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=1.03495) with  --  AT4G17950
136 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.845958) with  --  AT3G63400
137 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.889203) with  --  EMB2789; MOS7
138 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.84293) with  --  ABO1; AtELP1; ELO2
139 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.939722) with  --  AT5G46840
140 SE  --  has similar expression pattern (mutual information value=0.809887) with  --  AT4G31880  --  has similar expression pattern (mutual information value=0.916721) with  --  AT5G25060
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