Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node emb2004
Type: Protein GRN ID: np13053 Name: emb2004
Annotation: emb2004 | RNI-like superfamily protein
Gene Locus: AT1G10510
Gene Expression (Affy ATH1 probeset): 263212_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 emb2004  --  interacts with  --  AT3G44590
3 emb2004  --  interacts with  --  AT3G44590  --  interacts with  --  AT1G55880
4 emb2004  --  interacts with  --  AT3G44590  --  interacts with  --  AT1G01100
5 emb2004  --  interacts with  --  AT3G44590  --  interacts with  --  GASA5
6 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.43385) with  --  RPL24A
7 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08584) with  --  AT1G27400
8 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.906432) with  --  RPL10B
9 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.20315) with  --  AT1G29250
10 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.938729) with  --  AT2G41840
11 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.29653) with  --  AT3G05560
12 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.0477) with  --  AT3G04920
13 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.3164) with  --  AT3G07110
14 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08171) with  --  AT3G23390
15 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.22642) with  --  AtGRP4; GR-RBP4; GRP4
16 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.02939) with  --  AT3G22230
17 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.818074) with  --  AT2G34050
18 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.06528) with  --  TOM40
19 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.3339) with  --  AT1G07070
20 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.19701) with  --  AT2G33370
21 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.19185) with  --  AT4G29410
22 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.17767) with  --  AT4G29390
23 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G49080
24 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.24734) with  --  ROC2
25 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08782) with  --  AT3G58700
26 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.3038) with  --  AT5G02450
27 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.876694) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
28 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.27414) with  --  AT5G58420
29 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.41628) with  --  AT5G59850
30 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.35723) with  --  AT5G60670
31 emb2004  --  interacts with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.15539) with  --  AT4G16720
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact