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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G41840
Type: Protein GRN ID: np19650 Name:
Annotation: Ribosomal protein S5 family protein
Gene Locus: AT2G41840
Gene Expression (Affy ATH1 probeset): 260497_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G41840  --  interacts with  --  AT4G02220
3 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110
4 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560
5 AT2G41840  --  has similar expression pattern (mutual information value=0.871595) with  --  AT2G33370
6 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590
7 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450
8 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3
9 AT2G41840  --  has similar expression pattern (mutual information value=0.910889) with  --  AT5G58420
10 AT2G41840  --  has similar expression pattern (mutual information value=1.04274) with  --  AT5G19510
11 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.844391) with  --  OWL1
12 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.895964) with  --  OSB4
13 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.805939) with  --  AT1G71060
14 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.847789) with  --  AT4G01990
15 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.863923) with  --  AT5G22840
16 AT2G41840  --  interacts with  --  AT4G02220  --  has similar expression pattern (mutual information value=0.878979) with  --  AT4G37090
17 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.39054) with  --  AT2G27720
18 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.36741) with  --  AT2G27710
19 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.23419) with  --  AT2G42910
20 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.54842) with  --  RPL24A
21 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.25705) with  --  AT1G26880
22 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.27287) with  --  AT2G21580
23 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.16202) with  --  EMB2762
24 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11869) with  --  AT2G36160
25 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.29363) with  --  RPL27A; RPL27AB
26 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.32218) with  --  TOM6
27 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.27964) with  --  NOP56
28 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11796) with  --  AT1G80750
29 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.26716) with  --  AT1G55890
30 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.15584) with  --  AP40; P40; RP40; RPSAA
31 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.06565) with  --  AT1G73230
32 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.18922) with  --  ATVDAC1; VDAC1
33 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.01511) with  --  RPS2
34 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.34038) with  --  AT3G05560
35 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11758) with  --  AT3G01790
36 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.23755) with  --  AT3G09680
37 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.23755) with  --  AT5G02960
38 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.14318) with  --  RPS10
39 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.0476) with  --  CARA; VEN6
40 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.24395) with  --  AT3G11250
41 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.3826) with  --  AT4G12600
42 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.36382) with  --  AT4G25740
43 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11884) with  --  AT4G29390
44 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.25083) with  --  AT3G60770
45 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.30271) with  --  AT2G05220
46 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.30271) with  --  AT5G04800
47 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.30271) with  --  AT2G04390
48 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.43522) with  --  AT5G47930
49 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.27193) with  --  AT5G52650
50 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.26624) with  --  AT5G60670
51 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.48976) with  --  AT5G61170
52 AT2G41840  --  has similar expression pattern (mutual information value=0.937927) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.47157) with  --  AT5G16130
53 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.01672) with  --  AML1; ATRPS5A; RPS5A
54 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.903368) with  --  emb2386
55 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.957337) with  --  DECOY
56 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.830339) with  --  AT3G02080
57 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.02138) with  --  AT3G14600
58 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.993636) with  --  AT3G45030
59 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.950252) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
60 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.837283) with  --  AT5G06360
61 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.08734) with  --  EMB3010; RPS6B
62 AT2G41840  --  has similar expression pattern (mutual information value=1.10963) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.03371) with  --  AT5G23900
63 AT2G41840  --  has similar expression pattern (mutual information value=0.871595) with  --  AT2G33370  --  has similar expression pattern (mutual information value=1.02616) with  --  AT3G04920
64 AT2G41840  --  has similar expression pattern (mutual information value=0.871595) with  --  AT2G33370  --  has similar expression pattern (mutual information value=1.09159) with  --  AtGRP4; GR-RBP4; GRP4
65 AT2G41840  --  has similar expression pattern (mutual information value=0.871595) with  --  AT2G33370  --  has similar expression pattern (mutual information value=1.13127) with  --  AT5G59850
66 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  interacts with  --  emb2004
67 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  interacts with  --  AT1G55880
68 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  interacts with  --  AT1G01100
69 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  interacts with  --  GASA5
70 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08584) with  --  AT1G27400
71 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.906432) with  --  RPL10B
72 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.20315) with  --  AT1G29250
73 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08171) with  --  AT3G23390
74 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.02939) with  --  AT3G22230
75 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.818074) with  --  AT2G34050
76 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.06528) with  --  TOM40
77 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.3339) with  --  AT1G07070
78 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.19185) with  --  AT4G29410
79 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G49080
80 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.24734) with  --  ROC2
81 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.08782) with  --  AT3G58700
82 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.876694) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
83 AT2G41840  --  has similar expression pattern (mutual information value=0.938729) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.15539) with  --  AT4G16720
84 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  interacts with  --  TGA1
85 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  has similar expression pattern (mutual information value=0.93433) with  --  TIM10
86 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  has similar expression pattern (mutual information value=0.965141) with  --  AT4G18100
87 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  has similar expression pattern (mutual information value=0.965141) with  --  AT5G46430
88 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  has similar expression pattern (mutual information value=1.15671) with  --  EMB1080
89 AT2G41840  --  has similar expression pattern (mutual information value=0.854242) with  --  AT5G02450  --  has similar expression pattern (mutual information value=1.08311) with  --  AT5G03850
90 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3  --  interacts with  --  SIRANBP
91 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3  --  interacts with  --  AT2G30060
92 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3  --  has similar expression pattern (mutual information value=0.821143) with  --  AteIF3f; EIF2; eIF3F
93 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3  --  has similar expression pattern (mutual information value=0.933047) with  --  EMB2296
94 AT2G41840  --  has similar expression pattern (mutual information value=0.924818) with  --  ATRAN3; RAN3  --  has similar expression pattern (mutual information value=0.933047) with  --  AT4G36130
95 AT2G41840  --  has similar expression pattern (mutual information value=0.910889) with  --  AT5G58420  --  has similar expression pattern (mutual information value=1.20587) with  --  RACK1B; RACK1B_AT
96 AT2G41840  --  has similar expression pattern (mutual information value=0.910889) with  --  AT5G58420  --  has similar expression pattern (mutual information value=0.863534) with  --  emb1027
97 AT2G41840  --  has similar expression pattern (mutual information value=0.910889) with  --  AT5G58420  --  has similar expression pattern (mutual information value=0.89635) with  --  ATPRMT5; PRMT5; SKB1
98 AT2G41840  --  has similar expression pattern (mutual information value=1.04274) with  --  AT5G19510  --  interacts with  --  CERK1; LYSM RLK1
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