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Location:  Home > Details for node AT5G42940
Type: Protein GRN ID: np41043 Name:
Annotation: RING/U-box superfamily protein
Gene Locus: AT5G42940
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 249171_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G42940  --  interacts with  --  ANAC019; NAC019
3 AT5G42940  --  interacts with  --  UBC9
4 AT5G42940  --  interacts with  --  AT1G27690
5 AT5G42940  --  interacts with  --  IMPA-2
6 AT5G42940  --  interacts with  --  ATUBC11; UBC11
7 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16
8 AT5G42940  --  has similar expression pattern (mutual information value=0.80607) with  --  ATPSKR1; PSKR1
9 AT5G42940  --  has similar expression pattern (mutual information value=0.945569) with  --  AT2G18090
10 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5
11 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050
12 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC051; ANAC052; NAC052
13 AT5G42940  --  has similar expression pattern (mutual information value=0.83998) with  --  AT3G06480
14 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC
15 AT5G42940  --  has similar expression pattern (mutual information value=0.955491) with  --  AT3G47940
16 AT5G42940  --  has similar expression pattern (mutual information value=0.902692) with  --  AT3G62240
17 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500
18 AT5G42940  --  has similar expression pattern (mutual information value=0.808879) with  --  AT5G52530
19 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  TCP8
20 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  ATCIPK14; ATSR1; CIPK14; PKS24; SnRK3.15; SR1
21 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  AT4G23050
22 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  AT3G48510
23 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  ABI5
24 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  CIPK11; PKS5; SIP4; SNRK3.22
25 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  anac032; NAC032
26 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  AT1G10585
27 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  RHA2A
28 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  ATHB29; ZFHD1; ZHD11
29 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  AT-TCP20; ATTCP20; PCF1; TCP20
30 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  RHA1A
31 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  RHA2B
32 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  interacts with  --  ATCPL1; CPL1; FRY2
33 AT5G42940  --  interacts with  --  ANAC019; NAC019  --  regulates the expression of   --  VSP1
34 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  AT3G19950
35 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  AT2G37150
36 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  AT1G19310
37 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  AT3G49810
38 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  MUB6
39 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  MUB5
40 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  MUB4
41 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  ATGP4
42 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  MUB2
43 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  MUB1
44 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  ATCHIP; CHIP
45 AT5G42940  --  interacts with  --  UBC9  --  interacts with  --  CIN4; COP10; EMB144; FUS9
46 AT5G42940  --  interacts with  --  AT1G27690  --  interacts with  --  AT3G07120
47 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AtLHP1; LHP1; TFL2
48 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  bHLH071
49 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G20730
50 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G46840
51 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
52 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G19960
53 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G35110
54 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ATHB-2; ATHB2; HAT4; HB-2
55 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G17950
56 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G57120
57 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G45030
58 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ACT7
59 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G08560
60 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  KIWI
61 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G25920
62 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ATMAP70-5; MAP70-5
63 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT5G51910
64 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  HAT22
65 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G25660
66 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  TIFY8
67 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G17680
68 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT2G45820
69 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  FMA
70 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ATBET10; BET10
71 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ATBCA3; BCA3
72 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT3G49160
73 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT2G31410
74 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  IAA19
75 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  ABA2
76 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT4G10930
77 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT1G52380
78 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT1G52560
79 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AtMYB70; MYB70
80 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AtRZ-1b; RZ-1b
81 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT3G61950
82 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  KUF1
83 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  AT2G17350
84 AT5G42940  --  interacts with  --  IMPA-2  --  interacts with  --  NIMIN-2
85 AT5G42940  --  interacts with  --  IMPA-2  --  has similar expression pattern (mutual information value=0.88256) with  --  AT5G35430
86 AT5G42940  --  interacts with  --  IMPA-2  --  has similar expression pattern (mutual information value=0.813595) with  --  AT5G24690
87 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  interacts with  --  RFI2
88 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.83571) with  --  ATECH2; ECH2
89 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.852668) with  --  ERCC1; UVR7
90 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.804203) with  --  AT3G20800
91 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.813849) with  --  AAC3; ATAAC3
92 AT5G42940  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.872595) with  --  AT5G51510
93 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  interacts with  --  GBF1
94 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  interacts with  --  AtbZIP68; bZIP68
95 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  interacts with  --  GIP1
96 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  has similar expression pattern (mutual information value=0.825015) with  --  AT1G18950
97 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  has similar expression pattern (mutual information value=0.809639) with  --  TON1; TON1A
98 AT5G42940  --  has similar expression pattern (mutual information value=0.826531) with  --  AtbZIP16; bZIP16  --  has similar expression pattern (mutual information value=0.821311) with  --  AT5G17440
99 AT5G42940  --  has similar expression pattern (mutual information value=0.80607) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.844092) with  --  APK2B
100 AT5G42940  --  has similar expression pattern (mutual information value=0.80607) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.812186) with  --  AT1G63500
101 AT5G42940  --  has similar expression pattern (mutual information value=0.945569) with  --  AT2G18090  --  has similar expression pattern (mutual information value=0.805386) with  --  AT4G30100
102 AT5G42940  --  has similar expression pattern (mutual information value=0.945569) with  --  AT2G18090  --  has similar expression pattern (mutual information value=0.805386) with  --  AT2G19120
103 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.807995) with  --  AT4G21660
104 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.807995) with  --  AT1G11520
105 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=1.00443) with  --  AT3G16940
106 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.880141) with  --  ATSNX1; SNX1
107 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.871606) with  --  MED19A
108 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.844756) with  --  AT5G23130
109 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.844963) with  --  AT5G44080
110 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.801436) with  --  AT-HSFA4C; HSFA4C; RHA1
111 AT5G42940  --  has similar expression pattern (mutual information value=1.09711) with  --  SCL5  --  has similar expression pattern (mutual information value=0.811676) with  --  ATRCY1; RCY1
112 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  interacts with  --  JMJ14; PKDM7B
113 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  interacts with  --  AT3G18210
114 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  interacts with  --  CRT1
115 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  interacts with  --  AT3G54826
116 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.804786) with  --  AT2G18750
117 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=1.00432) with  --  SMC3; TTN7
118 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.807385) with  --  AT1G80550
119 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.839325) with  --  AT3G60410
120 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.814145) with  --  SNL2
121 AT5G42940  --  has similar expression pattern (mutual information value=0.908448) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.808409) with  --  TPR16
122 AT5G42940  --  has similar expression pattern (mutual information value=0.83998) with  --  AT3G06480  --  has similar expression pattern (mutual information value=0.903624) with  --  AT2G02160
123 AT5G42940  --  has similar expression pattern (mutual information value=0.83998) with  --  AT3G06480  --  has similar expression pattern (mutual information value=0.929835) with  --  SPT16
124 AT5G42940  --  has similar expression pattern (mutual information value=0.83998) with  --  AT3G06480  --  has similar expression pattern (mutual information value=0.83219) with  --  AT5G55670
125 AT5G42940  --  has similar expression pattern (mutual information value=0.83998) with  --  AT3G06480  --  has similar expression pattern (mutual information value=0.889073) with  --  AT5G19950
126 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  AT5G04920
127 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  VPS20.1
128 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  VPS22
129 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  VPS37-1
130 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  ELC-Like
131 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  AT2G36680
132 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1
133 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  AT1G15130
134 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  ATSKD1; SKD1; VPS4
135 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  VPS28-1; VPS28-2
136 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  AT4G32760
137 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  interacts with  --  VPS28-1
138 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  has similar expression pattern (mutual information value=0.81666) with  --  AT1G59910
139 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  has similar expression pattern (mutual information value=0.815485) with  --  OBE1
140 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  has similar expression pattern (mutual information value=0.817051) with  --  AT3G01430
141 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  has similar expression pattern (mutual information value=0.831529) with  --  BZIP28
142 AT5G42940  --  has similar expression pattern (mutual information value=0.811929) with  --  ATELC; ELC  --  has similar expression pattern (mutual information value=0.838427) with  --  ATEXO70B1; EXO70B1
143 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  interacts with  --  AT1G14740
144 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  interacts with  --  OBE2
145 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  has similar expression pattern (mutual information value=0.816106) with  --  AT2G45910
146 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  has similar expression pattern (mutual information value=0.811099) with  --  ATCDC5; ATMYBCDC5; CDC5
147 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  has similar expression pattern (mutual information value=0.85621) with  --  SKIP
148 AT5G42940  --  has similar expression pattern (mutual information value=0.843516) with  --  AT3G63500  --  has similar expression pattern (mutual information value=0.812862) with  --  EIN3
149 AT5G42940  --  has similar expression pattern (mutual information value=0.808879) with  --  AT5G52530  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30
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