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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G16940
Type: Protein GRN ID: np25167 Name:
Annotation: calmodulin binding;transcription regulators [TCDB:1.A.4.7] [TCDB:1.C.63.1] [TCDB:8.A.28.1]
Gene Locus: AT3G16940
Transcription factor /
transcriptional regulator:		 transcription factor family CG1-CAMTA
Gene Expression (Affy ATH1 probeset): 257883_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570
3 AT3G16940  --  has similar expression pattern (mutual information value=0.809221) with  --  ATEDR1; EDR1
4 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10
5 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5
6 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8
7 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1
8 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2
9 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680
10 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  interacts with  --  ARD1; ATARD1
11 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  interacts with  --  ASIL1
12 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.911321) with  --  AT1G60900
13 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.911321) with  --  AT1G60830
14 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.0698) with  --  SMP1
15 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.930988) with  --  ARF12
16 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.866199) with  --  AT1G79950
17 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.09662) with  --  AtBRCC36A; BRCC36A
18 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.09662) with  --  AtBRCC36B; BRCC36B
19 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.894117) with  --  AT1G32630
20 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.827279) with  --  AT1G63490
21 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.08776) with  --  ARI5; ATARI5
22 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.834562) with  --  AT3G21810
23 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.01763) with  --  AT3G12140
24 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.815408) with  --  AT4G13160
25 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.981803) with  --  AT4G18260
26 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.929722) with  --  CYCT1;4
27 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.00945) with  --  AT3G48120
28 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.912666) with  --  AT3G53390
29 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.882266) with  --  ATFIP37; FIP37
30 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G62080
31 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.82146) with  --  ATSNX1; SNX1
32 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.849536) with  --  AT5G08230
33 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.849536) with  --  ath-miR834
34 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.88124) with  --  NF-YB12
35 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.891999) with  --  AT5G08535
36 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.984093) with  --  NF-YB13
37 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.913058) with  --  ATGSTT2; GST10B; GSTT2
38 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.913058) with  --  ATGSTT3; GST10C; GSTT3
39 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.903125) with  --  AT5G44080
40 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.990748) with  --  AT5G47090
41 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.96438) with  --  AT5G65240
42 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.891601) with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
43 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=1.07984) with  --  ELF9
44 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.950775) with  --  AT1G31870
45 AT3G16940  --  has similar expression pattern (mutual information value=0.841267) with  --  AT2G02570  --  has similar expression pattern (mutual information value=0.944602) with  --  SMP2
46 AT3G16940  --  has similar expression pattern (mutual information value=0.809221) with  --  ATEDR1; EDR1  --  interacts with  --  AT1G04360
47 AT3G16940  --  has similar expression pattern (mutual information value=0.809221) with  --  ATEDR1; EDR1  --  interacts with  --  KEG
48 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.861976) with  --  AT2G16860
49 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.08875) with  --  AT2G02160
50 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.05835) with  --  AT1G15940
51 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.957327) with  --  AT3G09360
52 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.03768) with  --  CHR11
53 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.970427) with  --  NF-YC11
54 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.826608) with  --  AT4G26980
55 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.04238) with  --  SIS3
56 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.985686) with  --  SUA
57 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.939299) with  --  AT5G06780
58 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.00404) with  --  AT5G55670
59 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.0982) with  --  AT5G25520
60 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.07913) with  --  DOT2; MDF
61 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.900911) with  --  AT5G17440
62 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=0.825755) with  --  AT5G19430
63 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.06242) with  --  AT1G25988
64 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.06242) with  --  AT1G25682
65 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.00287) with  --  FAR1
66 AT3G16940  --  has similar expression pattern (mutual information value=0.886513) with  --  MBD10  --  has similar expression pattern (mutual information value=1.0802) with  --  SMU2
67 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.806971) with  --  ATPSKR1; PSKR1
68 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.807995) with  --  AT1G11520
69 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.868373) with  --  ATELC; ELC
70 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.882828) with  --  AT3G47940
71 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.871606) with  --  MED19A
72 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.844756) with  --  AT5G23130
73 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=1.09711) with  --  AT5G42940
74 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.801436) with  --  AT-HSFA4C; HSFA4C; RHA1
75 AT3G16940  --  has similar expression pattern (mutual information value=1.00443) with  --  SCL5  --  has similar expression pattern (mutual information value=0.811676) with  --  ATRCY1; RCY1
76 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  has similar expression pattern (mutual information value=0.853206) with  --  ATEXO70F1; EXO70F1
77 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  has similar expression pattern (mutual information value=0.806799) with  --  AtCRLK2; CRLK2
78 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  is the target gene of  --  ath-miR1888a
79 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  is the target gene of  --  ath-miR172d
80 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  is the target gene of  --  ath-miR172c
81 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  is the target gene of  --  ath-miR172b-3p
82 AT3G16940  --  has similar expression pattern (mutual information value=0.868642) with  --  NHL8  --  is the target gene of  --  ath-miR172a
83 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.863006) with  --  AT2G38410
84 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=1.12326) with  --  AT1G68140
85 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.822151) with  --  AT3G24740
86 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.834809) with  --  AT4G29380
87 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.834971) with  --  AT3G53930
88 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.84389) with  --  AT5G45190
89 AT3G16940  --  has similar expression pattern (mutual information value=0.857858) with  --  AtMTM1; MTM1  --  has similar expression pattern (mutual information value=0.823061) with  --  SSP4
90 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ABF1
91 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  AHG3/pp2ca
92 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  AHG1
93 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  CBF3
94 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  DREB2; DREB2A
95 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  AtERF48; DREB2C
96 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ABF3
97 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  SNRK2-2
98 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ATHB21; HB-2; HB21
99 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  AT3G23220
100 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  CDPK1A/CPK30
101 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ATCDPK1/CPK10
102 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ATCPK32
103 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ABF2/AREB1
104 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  FT?
105 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  interacts with  --  ATCDPK9; ATCPK12; CDPK9; CPK12
106 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  regulates the expression of   --  CYTC-2
107 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  is a member of  --  ABF1 family47, transcription factor gene
108 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  is modified by  --  CPK4
109 AT3G16940  --  has similar expression pattern (mutual information value=0.80391) with  --  ABF4/AREB2  --  is modified by  --  ATCDPK2/CPK11
110 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.950975) with  --  AT1G61690
111 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.856248) with  --  emb1220
112 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.856248) with  --  AT3G60610
113 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.802219) with  --  AT2G36840
114 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.826075) with  --  AT1G32810
115 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=1.05453) with  --  GTE4
116 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.881676) with  --  ATGSTU20; GSTU20
117 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.813508) with  --  EMB3011
118 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.882649) with  --  AT5G16505
119 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.944852) with  --  AT5G49880
120 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.805077) with  --  AT5G55600
121 AT3G16940  --  has similar expression pattern (mutual information value=0.9141) with  --  AT5G16680  --  has similar expression pattern (mutual information value=0.922266) with  --  AT5G24870
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

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