Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node APK2B
Type: Protein GRN ID: np19885 Name: APK2B
Annotation: APK2B | protein kinase 2B [TCDB:9.A.34.1] [TCDB:9.A.34.2] [EC:2.7.11.1]
Gene Locus: AT2G02800
Gene Expression (Affy ATH1 probeset): 267486_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 APK2B  --  has similar expression pattern (mutual information value=0.844092) with  --  ATPSKR1; PSKR1
3 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35
4 APK2B  --  has similar expression pattern (mutual information value=0.8174) with  --  AT5G11850
5 APK2B  --  has similar expression pattern (mutual information value=0.844092) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.808643) with  --  AT2G18090
6 APK2B  --  has similar expression pattern (mutual information value=0.844092) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.806971) with  --  SCL5
7 APK2B  --  has similar expression pattern (mutual information value=0.844092) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.812186) with  --  AT1G63500
8 APK2B  --  has similar expression pattern (mutual information value=0.844092) with  --  ATPSKR1; PSKR1  --  has similar expression pattern (mutual information value=0.80607) with  --  AT5G42940
9 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.811376) with  --  ATPI4K GAMMA 4; PI4K GAMMA 4; UBDK GAMMA 4
10 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.852835) with  --  PTAC/ATUHY1/ATWHY1
11 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.898746) with  --  AT1G53070
12 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.901146) with  --  AtSWEET1; SWEET1
13 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.819196) with  --  AT4G18950
14 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.805599) with  --  AT5G64130
15 APK2B  --  has similar expression pattern (mutual information value=0.873824) with  --  scpl35  --  has similar expression pattern (mutual information value=0.828691) with  --  AT4G14350
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact