Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G19310
Type: Protein GRN ID: np14133 Name:
Annotation: RING/U-box superfamily protein [TCDB:2.A.66.1] [EC:6.3.2.19]
Gene Locus: AT1G19310
Transcription factor /
transcriptional regulator:
transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 260671_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G19310  --  interacts with  --  UBC9
3 AT1G19310  --  interacts with  --  NDF6
4 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  AT5G42940
5 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  AT3G19950
6 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  AT2G37150
7 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  AT3G49810
8 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  MUB6
9 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  MUB5
10 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  MUB4
11 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  ATGP4
12 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  MUB2
13 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  MUB1
14 AT1G19310  --  interacts with  --  UBC9  --  interacts with  --  ATCHIP; CHIP
15 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AtRLP2; RLP2
16 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  RLK4
17 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT1G69910
18 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  ATKT1; ATKT1P; ATKUP1; KT1; KUP1
19 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT1G53290
20 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT1G14590
21 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT1G27120
22 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  CYP71B8
23 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT3G09800
24 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  AT1G66860
25 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  BAM3
26 AT1G19310  --  interacts with  --  NDF6  --  interacts with  --  ATBCA4; BCA4; CA4
27 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.52411) with  --  PPL2
28 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.50007) with  --  GDCH
29 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.45994) with  --  PQL1; PQL2
30 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.47031) with  --  NDF1; NDH48
31 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.30756) with  --  PSAO
32 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.36025) with  --  ATLFNR2; FNR2
33 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.22616) with  --  AT1G21500
34 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.45356) with  --  AT1G76450
35 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.44142) with  --  TAPX
36 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.37124) with  --  AT3G26080
37 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.37124) with  --  AT3G26070
38 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.30648) with  --  PSAD-1
39 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.62057) with  --  APX4; TL29
40 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.27147) with  --  PSAE-1
41 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.40547) with  --  AT3G47070
42 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.35359) with  --  OEC33; PSBO-2; PSBO2
43 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.56391) with  --  CSP41A
44 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.31787) with  --  HCF136
45 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.46033) with  --  ATPGLP1; PGLP1
46 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.46033) with  --  AT5G36790
47 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.36916) with  --  NDH18
48 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=0.802954) with  --  AT5G51720
49 AT1G19310  --  interacts with  --  NDF6  --  has similar expression pattern (mutual information value=1.46077) with  --  ATLFNR1; FNR1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab