Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node RFI2
Type: Protein GRN ID: np20592 Name: RFI2
Annotation: RFI2 | RING/U-box superfamily protein
Gene Locus: AT2G47700
Transcription factor /
transcriptional regulator:		 chromatin regulator family PHD
Gene Expression (Affy ATH1 probeset): 266513_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RFI2  --  interacts with  --  AT3G48240
3 RFI2  --  interacts with  --  AT4G32295
4 RFI2  --  interacts with  --  AT5G63130
5 RFI2  --  interacts with  --  TOE2
6 RFI2  --  interacts with  --  SLK2
7 RFI2  --  interacts with  --  ATUBC11; UBC11
8 RFI2  --  interacts with  --  AT4G14900
9 RFI2  --  interacts with  --  WAV2
10 RFI2  --  interacts with  --  AT1G31050
11 RFI2  --  interacts with  --  AT1G01440
12 RFI2  --  interacts with  --  UBC16
13 RFI2  --  interacts with  --  AT2G32840
14 RFI2  --  interacts with  --  AT1G09660
15 RFI2  --  interacts with  --  ZFP7
16 RFI2  --  interacts with  --  AT3G48240  --  interacts with  --  AT5G22355
17 RFI2  --  interacts with  --  AT3G48240  --  interacts with  --  AT5G64430
18 RFI2  --  interacts with  --  AT3G48240  --  interacts with  --  PDE331
19 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  PTF1; TCP13; TFPD
20 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  AT4G17680
21 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  ATBZIP24; BZIP24
22 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  AT4G22250
23 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  RAP2.7; TOE1
24 RFI2  --  interacts with  --  AT4G32295  --  interacts with  --  ATMYB84; MYB84; RAX3
25 RFI2  --  interacts with  --  AT5G63130  --  interacts with  --  AT2G19650
26 RFI2  --  interacts with  --  TOE2  --  interacts with  --  PLP3b
27 RFI2  --  interacts with  --  TOE2  --  interacts with  --  CHR3; SYD
28 RFI2  --  interacts with  --  TOE2  --  interacts with  --  HB-3; STIP; WOX9; WOX9A
29 RFI2  --  interacts with  --  TOE2  --  interacts with  --  JAI3
30 RFI2  --  interacts with  --  TOE2  --  interacts with  --  ATPEX5; EMB2790; PEX5
31 RFI2  --  interacts with  --  TOE2  --  interacts with  --  ATERF12
32 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AT3G28715
33 RFI2  --  interacts with  --  TOE2  --  interacts with  --  CDKC;1
34 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AtTCP11; TCP11
35 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AKIN11; ATKIN11; KIN11; SNRK1.2
36 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AO
37 RFI2  --  interacts with  --  TOE2  --  interacts with  --  CAO; CPSRP43
38 RFI2  --  interacts with  --  TOE2  --  interacts with  --  ATGRX2; CXIP2
39 RFI2  --  interacts with  --  TOE2  --  interacts with  --  LSU1
40 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AT3G48550
41 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AT3G09250
42 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AT2G37150
43 RFI2  --  interacts with  --  TOE2  --  interacts with  --  BRX
44 RFI2  --  interacts with  --  TOE2  --  interacts with  --  AT3G13990
45 RFI2  --  interacts with  --  TOE2  --  interacts with  --  TPR4; WSIP2
46 RFI2  --  interacts with  --  TOE2  --  interacts with  --  TPR2
47 RFI2  --  interacts with  --  TOE2  --  interacts with  --  TPR1
48 RFI2  --  interacts with  --  TOE2  --  interacts with  --  TPR3
49 RFI2  --  interacts with  --  TOE2  --  is the target gene of  --  ath-miR172e
50 RFI2  --  interacts with  --  TOE2  --  is the target gene of  --  ath-miR172d
51 RFI2  --  interacts with  --  TOE2  --  is the target gene of  --  ath-miR172c
52 RFI2  --  interacts with  --  TOE2  --  is the target gene of  --  ath-miR172b-3p
53 RFI2  --  interacts with  --  TOE2  --  is the target gene of  --  ath-miR172a
54 RFI2  --  interacts with  --  SLK2  --  interacts with  --  LUH; MUM1
55 RFI2  --  interacts with  --  SLK2  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
56 RFI2  --  interacts with  --  SLK2  --  interacts with  --  ADT4
57 RFI2  --  interacts with  --  SLK2  --  interacts with  --  AT3G58630
58 RFI2  --  interacts with  --  SLK2  --  interacts with  --  ANAC098; ATCUC2; CUC2
59 RFI2  --  interacts with  --  SLK2  --  interacts with  --  BP; BP1; KNAT1
60 RFI2  --  interacts with  --  ATUBC11; UBC11  --  interacts with  --  AT5G42940
61 RFI2  --  interacts with  --  ATUBC11; UBC11  --  interacts with  --  AT3G49810
62 RFI2  --  interacts with  --  ATUBC11; UBC11  --  interacts with  --  MUB4
63 RFI2  --  interacts with  --  ATUBC11; UBC11  --  interacts with  --  ATGP4
64 RFI2  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.83571) with  --  ATECH2; ECH2
65 RFI2  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.852668) with  --  ERCC1; UVR7
66 RFI2  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.804203) with  --  AT3G20800
67 RFI2  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.813849) with  --  AAC3; ATAAC3
68 RFI2  --  interacts with  --  ATUBC11; UBC11  --  has similar expression pattern (mutual information value=0.872595) with  --  AT5G51510
69 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  AT4G32190
70 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  AT5G59210
71 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  AT5G48385
72 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  AT4G01090
73 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  AT3G22440
74 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  ATGLK1; GLK1; GPRI1
75 RFI2  --  interacts with  --  AT4G14900  --  interacts with  --  ATBPM3; BPM3
76 RFI2  --  interacts with  --  AT4G14900  --  has similar expression pattern (mutual information value=0.821964) with  --  AT1G78150
77 RFI2  --  interacts with  --  WAV2  --  interacts with  --  AT5G01800
78 RFI2  --  interacts with  --  WAV2  --  interacts with  --  AT5G57035
79 RFI2  --  interacts with  --  WAV2  --  interacts with  --  AT3G50860
80 RFI2  --  interacts with  --  WAV2  --  interacts with  --  AT1G72180
81 RFI2  --  interacts with  --  WAV2  --  interacts with  --  ATELP; ATELP1; ATVSR1; BP-80; BP80; BP80-1;1; BP80B; GFS1; VSR1; VSR1;1
82 RFI2  --  interacts with  --  WAV2  --  has similar expression pattern (mutual information value=0.943889) with  --  ATUBP3; UBP3
83 RFI2  --  interacts with  --  AT1G31050  --  interacts with  --  ASIL1
84 RFI2  --  interacts with  --  AT1G31050  --  interacts with  --  UNE12
85 RFI2  --  interacts with  --  AT1G31050  --  interacts with  --  AT1G03040
86 RFI2  --  interacts with  --  AT1G31050  --  has similar expression pattern (mutual information value=0.8183) with  --  ATSBT4.12; SBT4.12
87 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  KAN; KAN1
88 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  ATY1; TRX-Y1; TY1
89 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT5G38640
90 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT2G45360
91 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT4G21705
92 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT3G56680
93 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT5G38420
94 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT3G51180
95 RFI2  --  interacts with  --  AT1G01440  --  interacts with  --  AT1G49850
96 RFI2  --  interacts with  --  UBC16  --  interacts with  --  AT5G19080
97 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  ATMAP70-5; MAP70-5
98 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  LSU2
99 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT3G50910
100 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT5G38600
101 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT2G47710
102 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT4G30330
103 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AtPPa5; PPa5
104 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  EDA33; GT140; IND; IND1
105 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT5G11980
106 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT3G56270
107 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  ATPUB14; PUB14
108 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT4G23770
109 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT4G39050
110 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
111 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT3G27960
112 RFI2  --  interacts with  --  AT2G32840  --  interacts with  --  AT1G06510
113 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G39740
114 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT5G51110
115 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  ATFKBP12; FKBP12
116 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT5G54580
117 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  PSAD-1
118 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G39100
119 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT3G15160
120 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G43370
121 RFI2  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G38610
122 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.803283) with  --  AT2G32730
123 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.978236) with  --  AT2G47790
124 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.913602) with  --  RIP3
125 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.853758) with  --  AT1G80790
126 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.858356) with  --  AT3G19650
127 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.844802) with  --  AT4G05400
128 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.89347) with  --  AT4G07950
129 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.89347) with  --  AT1G01210
130 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.971404) with  --  AT4G22350
131 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.971404) with  --  AT4G22285
132 RFI2  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.970564) with  --  AT5G57120
133 RFI2  --  interacts with  --  ZFP7  --  interacts with  --  AT5G51910
134 RFI2  --  interacts with  --  ZFP7  --  interacts with  --  VAR3
135 RFI2  --  interacts with  --  ZFP7  --  interacts with  --  MARD1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact