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Location:  Home > Details for node AT1G80550
Type: Protein GRN ID: np14825 Name:
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT1G80550
Gene Expression (Affy ATH1 probeset): 260273_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950
3 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050
4 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC051; ANAC052; NAC052
5 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1
6 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1
7 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=0.825015) with  --  AtbZIP16; bZIP16
8 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=0.900939) with  --  SMC3; TTN7
9 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=0.855103) with  --  AT1G16270
10 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=0.855103) with  --  AT1G79570
11 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=0.81105) with  --  ARF12
12 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  has similar expression pattern (mutual information value=1.00414) with  --  AT5G17440
13 AT1G80550  --  has similar expression pattern (mutual information value=0.848346) with  --  AT1G18950  --  interacts with  --  CHR11
14 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  interacts with  --  JMJ14; PKDM7B
15 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  interacts with  --  AT3G18210
16 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  interacts with  --  CRT1
17 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  interacts with  --  AT3G54826
18 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  interacts with  --  ERCC1; UVR7
19 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.804786) with  --  AT2G18750
20 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.839421) with  --  AT2G18090
21 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.839325) with  --  AT3G60410
22 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.908448) with  --  AT5G42940
23 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.814145) with  --  SNL2
24 AT1G80550  --  has similar expression pattern (mutual information value=0.807385) with  --  ANAC050; NAC050  --  has similar expression pattern (mutual information value=0.808409) with  --  TPR16
25 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
26 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  interacts with  --  ATCLASP; CLASP
27 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  interacts with  --  BLOS1
28 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.82146) with  --  AT2G02570
29 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.833825) with  --  SKIP
30 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.830198) with  --  SBI1
31 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.880141) with  --  SCL5
32 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.826231) with  --  ARI5; ATARI5
33 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.920614) with  --  AT3G63500
34 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.828217) with  --  MED19A
35 AT1G80550  --  has similar expression pattern (mutual information value=0.851723) with  --  ATSNX1; SNX1  --  has similar expression pattern (mutual information value=0.897605) with  --  AT5G55600
36 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.915722) with  --  AT2G45910
37 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.974576) with  --  ATCDC5; ATMYBCDC5; CDC5
38 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.964962) with  --  SMP1
39 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.806018) with  --  ATMEMB11; MEMB11
40 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.915459) with  --  AT2G21230
41 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.842026) with  --  WRKY4
42 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.992813) with  --  AT2G01100
43 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.887485) with  --  AT1G01930
44 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.948159) with  --  SUE3; VIP1
45 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=1.05988) with  --  AT3G07220
46 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=1.05988) with  --  AT3G07260
47 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.952254) with  --  AT3G12140
48 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.901237) with  --  CYCT1;4
49 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.837119) with  --  AT4G29380
50 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.811297) with  --  AT4G31410
51 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.810758) with  --  SIS3
52 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.813474) with  --  AT5G44080
53 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.922921) with  --  AT5G47090
54 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.833218) with  --  AT5G49400
55 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.968139) with  --  AT5G63640
56 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.841089) with  --  AT5G19430
57 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.841407) with  --  SBP1
58 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.978064) with  --  AT1G25988
59 AT1G80550  --  has similar expression pattern (mutual information value=0.920433) with  --  ATRCY1; RCY1  --  has similar expression pattern (mutual information value=0.978064) with  --  AT1G25682
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