Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G11520
Type: Protein GRN ID: np11843 Name:
Annotation: pliceosome associated protein-related
Gene Locus: AT1G11520
Gene Expression (Affy ATH1 probeset): 261872_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5
3 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH
4 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440
5 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.806971) with  --  ATPSKR1; PSKR1
6 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.807995) with  --  AT4G21660
7 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=1.00443) with  --  AT3G16940
8 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.868373) with  --  ATELC; ELC
9 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.882828) with  --  AT3G47940
10 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.880141) with  --  ATSNX1; SNX1
11 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.871606) with  --  MED19A
12 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.844756) with  --  AT5G23130
13 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=1.09711) with  --  AT5G42940
14 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.844963) with  --  AT5G44080
15 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.801436) with  --  AT-HSFA4C; HSFA4C; RHA1
16 AT1G11520  --  has similar expression pattern (mutual information value=0.807995) with  --  SCL5  --  has similar expression pattern (mutual information value=0.811676) with  --  ATRCY1; RCY1
17 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.909997) with  --  AT2G39260
18 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=1.03669) with  --  AT2G02160
19 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.814935) with  --  AT2G40650
20 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.917538) with  --  ATRING1B; RING1B
21 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.995721) with  --  CHR5
22 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.900158) with  --  AT1G15200
23 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.848027) with  --  AT2G01100
24 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.936168) with  --  AT1G15940
25 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.93619) with  --  SPT16
26 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.968264) with  --  AT5G45190
27 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=1.09949) with  --  AT5G25060
28 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.867655) with  --  AT1G25988
29 AT1G11520  --  has similar expression pattern (mutual information value=0.925414) with  --  TGH  --  has similar expression pattern (mutual information value=0.867655) with  --  AT1G25682
30 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.821311) with  --  AtbZIP16; bZIP16
31 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.861632) with  --  AT2G17410
32 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.919414) with  --  AT3G61420
33 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.919414) with  --  AT1G55750
34 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.891596) with  --  AT1G60200
35 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.902676) with  --  SMC3; TTN7
36 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.862926) with  --  AT1G16270
37 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.862926) with  --  AT1G79570
38 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.900911) with  --  MBD10
39 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.876625) with  --  ARF12
40 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.840061) with  --  AT1G02890
41 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=1.00414) with  --  AT1G18950
42 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.837898) with  --  ATS6A.2; RPT5A
43 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.977464) with  --  AT3G06480
44 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.874441) with  --  AT3G45190
45 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.899991) with  --  AT5G28330
46 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.899991) with  --  AT5G28390
47 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.899991) with  --  AT3G52660
48 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.928544) with  --  SUA
49 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.890966) with  --  TON1; TON1A
50 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.900188) with  --  AtLHP1; LHP1; TFL2
51 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.906165) with  --  At-RS41; ATRSP41; RS41
52 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=1.08457) with  --  ELF9
53 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.986024) with  --  DOT2; MDF
54 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.830561) with  --  AT4G36960
55 AT1G11520  --  has similar expression pattern (mutual information value=0.874149) with  --  AT5G17440  --  has similar expression pattern (mutual information value=0.870954) with  --  AT5G19950
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact