Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G16070
Type: Protein GRN ID: np35859 Name:
Annotation: TCP-1/cpn60 chaperonin family protein
Gene Locus: AT5G16070
Gene Expression (Affy ATH1 probeset): 246480_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G16070  --  interacts with  --  AHK4
3 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770
4 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590
5 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09690
6 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10
7 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780
8 AT5G16070  --  has similar expression pattern (mutual information value=0.942034) with  --  AT5G27330
9 AT5G16070  --  interacts with  --  AHK4  --  regulates the expression of   --  ETH family62, coding gene
10 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT3G11070
11 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT1G62070
12 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT5G59613
13 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT4G15630
14 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT5G60570
15 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT2G47950
16 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  ASG2
17 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT2G45820
18 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  LSH1; OBO2
19 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  ALMT1; ATALMT1
20 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  EMB30; GN; VAN7
21 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
22 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  LHCB2; LHCB2.2
23 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT1G51650
24 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  GAPC-2; GAPC2
25 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  GAPCP-1
26 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT5G58090
27 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  ATAMPD; FAC1
28 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  BLH4; SAW2
29 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT1G25260
30 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AT5G59850
31 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  ATWNK5; WNK5; ZIK1
32 AT5G16070  --  interacts with  --  AHK4  --  interacts with  --  AHP2
33 AT5G16070  --  interacts with  --  AHK4  --  transport  --  Protein-cysteine
34 AT5G16070  --  interacts with  --  AHK4  --  transport  --  Bile salt
35 AT5G16070  --  interacts with  --  AHK4  --  transport  --  Polypeptide
36 AT5G16070  --  interacts with  --  AHK4  --  transport  --  HCO3-
37 AT5G16070  --  interacts with  --  AHK4  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
38 AT5G16070  --  interacts with  --  AHK4  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
39 AT5G16070  --  interacts with  --  AHK4  --  is the target gene of  --  ath-miR419
40 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.03164) with  --  AT2G18520
41 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.913492) with  --  AT2G40430
42 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.962648) with  --  AT1G13160
43 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.971681) with  --  NFD5
44 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.961877) with  --  ATKRS-1
45 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.22987) with  --  AT3G22660
46 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.978244) with  --  AT3G12390
47 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.945035) with  --  AT4G10480
48 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.973767) with  --  AT4G22000
49 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.14093) with  --  NFD1
50 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.03488) with  --  AT4G31810
51 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.13253) with  --  emb2474; TIM9
52 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.01708) with  --  NACA3
53 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.801675) with  --  AT5G23540
54 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=0.80981) with  --  AT5G56500
55 AT5G16070  --  has similar expression pattern (mutual information value=0.850941) with  --  AT1G60770  --  has similar expression pattern (mutual information value=1.15281) with  --  PNM1
56 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.813615) with  --  AT2G33840
57 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.813615) with  --  AT1G28350
58 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.06562) with  --  AT2G39390
59 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.13739) with  --  AT2G25210
60 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.985364) with  --  AT2G31725
61 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.22574) with  --  AT1G64880
62 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.13118) with  --  AT1G73940
63 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.22338) with  --  AT3G10090
64 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.43663) with  --  AT3G06700
65 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.986746) with  --  AT3G08520
66 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.986746) with  --  AT2G40205
67 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.986746) with  --  AT3G56020
68 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.986746) with  --  AT3G11120
69 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.3522) with  --  AT3G59650
70 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.51093) with  --  AT3G60245
71 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.841209) with  --  AT5G44710
72 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.992615) with  --  AT5G47210
73 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.843456) with  --  PSL4
74 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.931986) with  --  AT5G56710
75 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.970268) with  --  AT5G57120
76 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.11109) with  --  AT5G64670
77 AT5G16070  --  has similar expression pattern (mutual information value=0.903668) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.00113) with  --  AT4G17520
78 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.12237) with  --  AT2G34357
79 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.03897) with  --  AT2G20710
80 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.12693) with  --  AT4G25730
81 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=0.818932) with  --  EMB3012
82 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.15884) with  --  GR-RBP3
83 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.01321) with  --  AT4G36680
84 AT5G16070  --  has similar expression pattern (mutual information value=0.902609) with  --  ATPRMT10; PRMT10  --  has similar expression pattern (mutual information value=1.05168) with  --  AT5G19300
85 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060
86 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.952202) with  --  AT1G20220
87 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT4G21460
88 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT3G18240
89 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080
90 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.84192) with  --  AT4G25890
91 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57
92 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.994185) with  --  AT5G08180
93 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.995608) with  --  AT5G59240
94 AT5G16070  --  has similar expression pattern (mutual information value=0.939468) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520
95 AT5G16070  --  has similar expression pattern (mutual information value=0.942034) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.830271) with  --  AtTRM82; TRM82
96 AT5G16070  --  has similar expression pattern (mutual information value=0.942034) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.89627) with  --  ATCXXS1; CXXS1
97 AT5G16070  --  has similar expression pattern (mutual information value=0.942034) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.833698) with  --  AT1G55000
98 AT5G16070  --  has similar expression pattern (mutual information value=0.942034) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.884269) with  --  AT5G33300
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact