Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node EMB30; GN; VAN7
Type: Protein GRN ID: np13588 Name: EMB30; GN; VAN7
Annotation: GN, VAN7, EMB30 | sec7 domain-containing protein
Gene Locus: AT1G13980
Gene Expression (Affy ATH1 probeset): 262614_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 EMB30; GN; VAN7  --  interacts with  --  ATCYP5; CYP19-4; CYP5
3 EMB30; GN; VAN7  --  interacts with  --  AHK4
4 EMB30; GN; VAN7  --  interacts with  --  ATCYP5; CYP19-4; CYP5  --  has product (in catalytic reaction)  --  Peptidylproline (omega=0)
5 EMB30; GN; VAN7  --  interacts with  --  ATCYP5; CYP19-4; CYP5  --  transport  --  Lead
6 EMB30; GN; VAN7  --  interacts with  --  ATCYP5; CYP19-4; CYP5  --  transport  --  Polypeptide
7 EMB30; GN; VAN7  --  interacts with  --  ATCYP5; CYP19-4; CYP5  --  transport  --  Sterol
8 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  regulates the expression of   --  ETH family62, coding gene
9 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT3G11070
10 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT1G62070
11 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT5G59613
12 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT4G15630
13 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT5G60570
14 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT2G47950
15 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  ASG2
16 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT2G45820
17 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  LSH1; OBO2
18 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  ALMT1; ATALMT1
19 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
20 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  LHCB2; LHCB2.2
21 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT1G51650
22 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  GAPC-2; GAPC2
23 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  GAPCP-1
24 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT5G58090
25 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  ATAMPD; FAC1
26 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  BLH4; SAW2
27 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT1G25260
28 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT5G59850
29 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AT5G16070
30 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  ATWNK5; WNK5; ZIK1
31 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  interacts with  --  AHP2
32 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  transport  --  Protein-cysteine
33 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  transport  --  Bile salt
34 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  transport  --  HCO3-
35 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
36 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
37 EMB30; GN; VAN7  --  interacts with  --  AHK4  --  is the target gene of  --  ath-miR419
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact