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Location:  Home > Details for node LHCB2; LHCB2.2
Type: Protein GRN ID: np19302 Name: LHCB2; LHCB2.2
Annotation: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 [TCDB:3.A.1.1] [TCDB:3.A.1.122] [TCDB:3.A.1.25] [TCDB:3.A.1.5]
Gene Locus: AT2G05070
Gene Expression (Affy ATH1 probeset): 263345_s_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LHCB2; LHCB2.2  --  interacts with  --  AHK4
3 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1
4 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB180; CAB3; LHCB1.2
5 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB140; CAB1; CAB140; LHCB1.3
6 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940
7 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4
8 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970
9 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.857275) with  --  AT5G21100
10 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA
11 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)
12 LHCB2; LHCB2.2  --  transport  --  Lactose
13 LHCB2; LHCB2.2  --  transport  --  Maltose
14 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  regulates the expression of   --  ETH family62, coding gene
15 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT3G11070
16 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT1G62070
17 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT5G59613
18 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT4G15630
19 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT5G60570
20 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT2G47950
21 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  ASG2
22 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT2G45820
23 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  LSH1; OBO2
24 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  ALMT1; ATALMT1
25 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  EMB30; GN; VAN7
26 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
27 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT1G51650
28 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  GAPC-2; GAPC2
29 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  GAPCP-1
30 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT5G58090
31 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  ATAMPD; FAC1
32 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  BLH4; SAW2
33 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT1G25260
34 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT5G59850
35 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AT5G16070
36 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  ATWNK5; WNK5; ZIK1
37 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  interacts with  --  AHP2
38 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  transport  --  Protein-cysteine
39 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  transport  --  Bile salt
40 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  transport  --  Polypeptide
41 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  transport  --  HCO3-
42 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
43 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
44 LHCB2; LHCB2.2  --  interacts with  --  AHK4  --  is the target gene of  --  ath-miR419
45 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  NPQ4; PSBS
46 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  CAO; CPSRP43
47 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  ARR15
48 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.57889) with  --  LHB1B1; LHCB1.4
49 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.3336) with  --  PSAG
50 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.35082) with  --  LHCB2; LHCB2.1
51 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41135) with  --  LHCB4.2
52 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.23611) with  --  PSAK
53 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.30797) with  --  PSAD-1
54 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.36386) with  --  CAB4; LHCA4
55 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41067) with  --  AT5G28450
56 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41067) with  --  LHCA2
57 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.822801) with  --  RLM3
58 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.834759) with  --  ATPE
59 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.833148) with  --  PSBM
60 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  transport  --  Zinc cation
61 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  is regulated by  --  HY5
62 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  is regulated by  --  AT5G01380
63 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  is modified by  --  STN8
64 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB165; CAB2; LHCB1.1  --  is modified by  --  STN7
65 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB180; CAB3; LHCB1.2  --  interacts with  --  CYO1; SCO2
66 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  AtCCA1; CCA1
67 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  ATMYC2
68 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.35082) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  LHY; LHY1
69 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.926098) with  --  AGP17; ATAGP17
70 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=1.03532) with  --  TBL45
71 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.835961) with  --  ATLTP1; LP1; LTP1
72 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.930218) with  --  CRB; CSP41B; HIP1.3
73 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.941464) with  --  AT1G06830
74 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.943406) with  --  ATGER1; GER1; GLP1
75 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.883238) with  --  PETC; PGR1
76 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.977514) with  --  AT4G38840
77 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.842895) with  --  FBA2
78 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.818116) with  --  AT5G48490
79 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.848161) with  --  AT1G66940  --  has similar expression pattern (mutual information value=0.810655) with  --  pal3
80 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.3689) with  --  AT2G34620
81 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.09388) with  --  RPOD1; SIG1; SIG2; SIGA; SIGB
82 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.09069) with  --  AT1G74470
83 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=0.884446) with  --  XTH7
84 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.06859) with  --  ACA1; ATACA1; CAH1
85 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.45449) with  --  ACSF; CHL27; CRD1
86 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.38398) with  --  CCH/CHLH/GUN5
87 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.25959) with  --  psy
88 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=0.991422) with  --  SFP2
89 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.00905) with  --  AT4G16980
90 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.0332) with  --  GUN4  --  has similar expression pattern (mutual information value=1.37728) with  --  ATCAO; CAO; CH1
91 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.927749) with  --  AT2G34460
92 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.932221) with  --  ANTR1; PHT4;1
93 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.905626) with  --  AT2G35260
94 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.953511) with  --  AOR
95 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.887431) with  --  AT2G21340
96 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.924388) with  --  AT2G04039
97 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.93382) with  --  Deg1; DEGP1
98 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.92544) with  --  HCF173
99 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.910741) with  --  AtGLDP1; GLDP1
100 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.991806) with  --  AT4G35250
101 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.970922) with  --  ATATH13; ATH13; ATOSA1; OSA1
102 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.970868) with  --  AT5G35970  --  has similar expression pattern (mutual information value=0.857038) with  --  AT5G67370
103 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.857275) with  --  AT5G21100  --  has similar expression pattern (mutual information value=1.03004) with  --  AT3G50685
104 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=0.857275) with  --  AT5G21100  --  has product (in catalytic reaction)  --  Monodehydroascorbate
105 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.08938) with  --  PGR5
106 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=0.982641) with  --  AT1G65490
107 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.1351) with  --  AOAT1; GGAT1; GGT1
108 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.33517) with  --  OE23; OEE2; PSBP-1; PSII-P
109 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.14696) with  --  ATCDSP32; CDSP32
110 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.40097) with  --  DRT112; PETE2
111 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=0.917914) with  --  UNE10
112 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.24383) with  --  SHM1; SHMT1; STM
113 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.15741) with  --  LHCA1
114 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.14621) with  --  ATPGLP1; PGLP1
115 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.14621) with  --  AT5G36790
116 LHCB2; LHCB2.2  --  has similar expression pattern (mutual information value=1.10262) with  --  RCA  --  has similar expression pattern (mutual information value=1.29935) with  --  FD-GOGAT; GLS1; GLU1; GLUS
117 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)  --  is transported by  --  MSS3
118 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)  --  is transported by  --  sks16
119 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)  --  is transported by  --  ATSYTA; NTMC2T1.1; NTMC2TYPE1.1; SYT1; SYTA
120 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)  --  is transported by  --  PSAE-2
121 LHCB2; LHCB2.2  --  transport  --  alpha-D-Glucosylpoly(glycerol phosphate)  --  is transported by  --  AT2G18240
122 LHCB2; LHCB2.2  --  transport  --  Lactose  --  is transported by  --  AKR4C8
123 LHCB2; LHCB2.2  --  transport  --  Lactose  --  is transported by  --  HSP70T-2
124 LHCB2; LHCB2.2  --  transport  --  Lactose  --  is transported by  --  PR1
125 LHCB2; LHCB2.2  --  transport  --  Lactose  --  is transported by  --  AT2G07718
126 LHCB2; LHCB2.2  --  transport  --  Lactose  --  is transported by  --  RIE1
127 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  ATCNGC1; CNGC1
128 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G53010
129 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  ABCG8
130 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G52450
131 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  HCF106
132 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G52050
133 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  ATKEA5; KEA5
134 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G51160
135 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G51050
136 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G50140
137 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  AT5G49990
138 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  PSD
139 LHCB2; LHCB2.2  --  transport  --  Maltose  --  is transported by  --  BIP3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

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