Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G47950
Type: Protein GRN ID: np20454 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT2G47950
Gene Expression (Affy ATH1 probeset): 266486_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G47950  --  interacts with  --  AHK4
3 AT2G47950  --  interacts with  --  AHK4  --  regulates the expression of   --  ETH family62, coding gene
4 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT3G11070
5 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT1G62070
6 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT5G59613
7 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT4G15630
8 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT5G60570
9 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  ASG2
10 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT2G45820
11 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  LSH1; OBO2
12 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  ALMT1; ATALMT1
13 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  EMB30; GN; VAN7
14 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
15 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  LHCB2; LHCB2.2
16 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT1G51650
17 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  GAPC-2; GAPC2
18 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  GAPCP-1
19 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT5G58090
20 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  ATAMPD; FAC1
21 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  BLH4; SAW2
22 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT1G25260
23 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT5G59850
24 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AT5G16070
25 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  ATWNK5; WNK5; ZIK1
26 AT2G47950  --  interacts with  --  AHK4  --  interacts with  --  AHP2
27 AT2G47950  --  interacts with  --  AHK4  --  transport  --  Protein-cysteine
28 AT2G47950  --  interacts with  --  AHK4  --  transport  --  Bile salt
29 AT2G47950  --  interacts with  --  AHK4  --  transport  --  Polypeptide
30 AT2G47950  --  interacts with  --  AHK4  --  transport  --  HCO3-
31 AT2G47950  --  interacts with  --  AHK4  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
32 AT2G47950  --  interacts with  --  AHK4  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
33 AT2G47950  --  interacts with  --  AHK4  --  is the target gene of  --  ath-miR419
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab