Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G06700
Type: Protein GRN ID: np28938 Name:
Annotation: Ribosomal L29e protein family
Gene Locus: AT3G06700
Gene Expression (Affy ATH1 probeset): 258532_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390
3 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730
4 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1
5 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590
6 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09690
7 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210
8 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940
9 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090
10 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390
11 AT3G06700  --  has similar expression pattern (mutual information value=0.936794) with  --  AT4G31985
12 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650
13 AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245
14 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440
15 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G18740
16 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.05641) with  --  AT2G32060
17 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G18400
18 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.853651) with  --  AT1G77750
19 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G08520
20 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT2G40205
21 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G56020
22 AT3G06700  --  has similar expression pattern (mutual information value=1.08005) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G11120
23 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
24 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730  --  has similar expression pattern (mutual information value=1.09707) with  --  AT3G05560
25 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730  --  has similar expression pattern (mutual information value=0.990897) with  --  TOM40
26 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730  --  has similar expression pattern (mutual information value=0.863808) with  --  AT4G05400
27 AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730  --  has similar expression pattern (mutual information value=1.18514) with  --  AT3G58700
28 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  interacts with  --  ATNAP5; NAP5
29 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.833802) with  --  SNRNP-G
30 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.843871) with  --  NRPB6B; NRPE6B
31 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.983001) with  --  AT1G64880
32 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.8832) with  --  AT4G30330
33 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G58990
34 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G52370
35 AT3G06700  --  has similar expression pattern (mutual information value=0.969871) with  --  PFD1  --  has similar expression pattern (mutual information value=1.07201) with  --  AT5G64670
36 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.813615) with  --  AT2G33840
37 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.813615) with  --  AT1G28350
38 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.985364) with  --  AT2G31725
39 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.03238) with  --  ATPRMT10; PRMT10
40 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.27373) with  --  AT4G22000
41 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.03333) with  --  AT4G27090
42 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.985245) with  --  NFD1
43 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.02639) with  --  NACA3
44 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.841209) with  --  AT5G44710
45 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.992615) with  --  AT5G47210
46 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.843456) with  --  PSL4
47 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.970268) with  --  AT5G57120
48 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.12136) with  --  PNM1
49 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=0.903668) with  --  AT5G16070
50 AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590  --  has similar expression pattern (mutual information value=1.00113) with  --  AT4G17520
51 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.903949) with  --  AT2G25670
52 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.829061) with  --  AT2G21290
53 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.01562) with  --  AT3G06040
54 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.02913) with  --  emb2474; TIM9
55 AT3G06700  --  has similar expression pattern (mutual information value=1.11879) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.844378) with  --  AT3G49100
56 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.12552) with  --  AT1G23100
57 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.857657) with  --  AT3G02650
58 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.00003) with  --  AT3G16080
59 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.984855) with  --  ATTCP-1; TCP-1
60 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.06023) with  --  AT3G12390
61 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.108) with  --  AT4G23620
62 AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.948671) with  --  AT5G46160
63 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=0.944062) with  --  AT2G20710
64 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.09547) with  --  TIM13
65 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=0.959567) with  --  AT2G40430
66 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.06041) with  --  AT1G04480
67 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.13043) with  --  HTA8
68 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=0.876526) with  --  ATKRS-1
69 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.04464) with  --  AT3G22660
70 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.16609) with  --  AT4G10480
71 AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090  --  has similar expression pattern (mutual information value=1.10843) with  --  AT3G52040
72 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  interacts with  --  IAA11
73 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  interacts with  --  ATCSP3; CSP3
74 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.06143) with  --  TIM10
75 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.923815) with  --  RPL18
76 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G06680
77 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.13495) with  --  AT1G07070
78 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.08171) with  --  AT3G44590
79 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.27508) with  --  AT5G03850
80 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.994091) with  --  TIM8
81 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.11526) with  --  AT5G27770
82 AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.22586) with  --  AT5G09510
83 AT3G06700  --  has similar expression pattern (mutual information value=0.936794) with  --  AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3
84 AT3G06700  --  has similar expression pattern (mutual information value=0.936794) with  --  AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1
85 AT3G06700  --  has similar expression pattern (mutual information value=0.936794) with  --  AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840
86 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650  --  has similar expression pattern (mutual information value=1.08339) with  --  AT1G27435
87 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650  --  has similar expression pattern (mutual information value=1.02018) with  --  rps15ae
88 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650  --  has similar expression pattern (mutual information value=0.895152) with  --  AT3G62810
89 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650  --  has similar expression pattern (mutual information value=1.12851) with  --  AT5G61310
90 AT3G06700  --  has similar expression pattern (mutual information value=1.24362) with  --  AT3G59650  --  has similar expression pattern (mutual information value=0.836789) with  --  ATFKBP12; FKBP12
91 AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245  --  interacts with  --  AT1G08590
92 AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245  --  has similar expression pattern (mutual information value=1.05116) with  --  AT4G18100
93 AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245  --  has similar expression pattern (mutual information value=0.879558) with  --  AT5G15610
94 AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245  --  has similar expression pattern (mutual information value=0.906158) with  --  AT2G41650
95 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.848281) with  --  AT1G79470
96 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.857591) with  --  HSP60; HSP60-3B
97 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.973889) with  --  AT5G06550
98 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G23250
99 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.907448) with  --  RID2
100 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.923102) with  --  AT1G23280
101 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.814196) with  --  AT1G01940
102 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.839603) with  --  AT1G06720
103 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.816413) with  --  AT1G73180
104 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.02641) with  --  AT3G57000
105 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.04009) with  --  ATEBP1; ATG2; EBP1
106 AT3G06700  --  has similar expression pattern (mutual information value=1.15374) with  --  AT5G62440  --  interacts with  --  ARR5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact