Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G20220
Type: Protein GRN ID: np15507 Name:
Annotation: Alba DNA/RNA-binding protein
Gene Locus: AT1G20220
Gene Expression (Affy ATH1 probeset): 261232_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780
3 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060
4 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770
5 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10
6 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5
7 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.887772) with  --  ATTCP-1; TCP-1
8 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT4G21460
9 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT3G18240
10 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080
11 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480
12 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.84192) with  --  AT4G25890
13 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57
14 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.994185) with  --  AT5G08180
15 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210
16 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.995608) with  --  AT5G59240
17 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330
18 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.939468) with  --  AT5G16070
19 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680
20 AT1G20220  --  has similar expression pattern (mutual information value=0.952202) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact