Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node LSH1; OBO2
Type: Protein GRN ID: np41401 Name: LSH1; OBO2
Annotation: LSH1 | Protein of unknown function (DUF640)
Gene Locus: AT5G28490
Gene Expression (Affy ATH1 probeset): 246137_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 LSH1; OBO2  --  interacts with  --  ARR6
3 LSH1; OBO2  --  interacts with  --  AHK4
4 LSH1; OBO2  --  interacts with  --  ARR6  --  regulates the expression of   --  ABI5
5 LSH1; OBO2  --  interacts with  --  ARR6  --  is regulated by  --  ARR10
6 LSH1; OBO2  --  interacts with  --  ARR6  --  is regulated by  --  ARR2
7 LSH1; OBO2  --  interacts with  --  ARR6  --  is regulated by  --  ARR1
8 LSH1; OBO2  --  interacts with  --  ARR6  --  interacts with  --  GTE7
9 LSH1; OBO2  --  interacts with  --  ARR6  --  interacts with  --  AT5G63460
10 LSH1; OBO2  --  interacts with  --  ARR6  --  interacts with  --  AZF3; ZF3
11 LSH1; OBO2  --  interacts with  --  ARR6  --  is a member of  --  ARR3 family69, response regulator and putative novel transcription factor gene
12 LSH1; OBO2  --  interacts with  --  ARR6  --  is a member of  --  ARR3 family73, response regulator and putative novel transcription factor gene
13 LSH1; OBO2  --  interacts with  --  AHK4  --  regulates the expression of   --  ETH family62, coding gene
14 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT3G11070
15 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT1G62070
16 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT5G59613
17 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT4G15630
18 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT5G60570
19 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT2G47950
20 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  ASG2
21 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT2G45820
22 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  ALMT1; ATALMT1
23 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  EMB30; GN; VAN7
24 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  ATHH2; PIP1;2; PIP1B; TMP-A
25 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  LHCB2; LHCB2.2
26 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT1G51650
27 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  GAPC-2; GAPC2
28 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  GAPCP-1
29 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT5G58090
30 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  ATAMPD; FAC1
31 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  BLH4; SAW2
32 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT1G25260
33 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT5G59850
34 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AT5G16070
35 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  ATWNK5; WNK5; ZIK1
36 LSH1; OBO2  --  interacts with  --  AHK4  --  interacts with  --  AHP2
37 LSH1; OBO2  --  interacts with  --  AHK4  --  transport  --  Protein-cysteine
38 LSH1; OBO2  --  interacts with  --  AHK4  --  transport  --  Bile salt
39 LSH1; OBO2  --  interacts with  --  AHK4  --  transport  --  Polypeptide
40 LSH1; OBO2  --  interacts with  --  AHK4  --  transport  --  HCO3-
41 LSH1; OBO2  --  interacts with  --  AHK4  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
42 LSH1; OBO2  --  interacts with  --  AHK4  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
43 LSH1; OBO2  --  interacts with  --  AHK4  --  is the target gene of  --  ath-miR419
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact