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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G25890
Type: Protein GRN ID: np33607 Name:
Annotation: 60S acidic ribosomal protein family
Gene Locus: AT4G25890
Gene Expression (Affy ATH1 probeset): 254030_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780
3 AT4G25890  --  has similar expression pattern (mutual information value=0.806434) with  --  AT5G08180
4 AT4G25890  --  has similar expression pattern (mutual information value=0.821797) with  --  AT5G59240
5 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.988972) with  --  AT2G32060
6 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.98237) with  --  AT1G60770
7 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.952202) with  --  AT1G20220
8 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.941415) with  --  ATPRMT10; PRMT10
9 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.94728) with  --  NFD5
10 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.887772) with  --  ATTCP-1; TCP-1
11 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT4G21460
12 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.851197) with  --  AT3G18240
13 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.925665) with  --  AT3G24080
14 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.00694) with  --  AT4G10480
15 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.01783) with  --  AtCBF5; AtNAP57; CBF5; NAP57
16 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.06488) with  --  AT5G47210
17 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=1.09703) with  --  AT5G27330
18 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.939468) with  --  AT5G16070
19 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.869202) with  --  AT4G36680
20 AT4G25890  --  has similar expression pattern (mutual information value=0.84192) with  --  AT3G16780  --  has similar expression pattern (mutual information value=0.896475) with  --  AT5G13520
21 AT4G25890  --  has similar expression pattern (mutual information value=0.821797) with  --  AT5G59240  --  has similar expression pattern (mutual information value=0.82281) with  --  AT1G23410
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