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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G03960
Type: Protein GRN ID: np29507 Name:
Annotation: TCP-1/cpn60 chaperonin family protein
Gene Locus: AT3G03960
Gene Expression (Affy ATH1 probeset): 258816_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G03960  --  interacts with  --  AT3G11830
3 AT3G03960  --  interacts with  --  AT1G24510
4 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060
5 AT3G03960  --  has similar expression pattern (mutual information value=0.846295) with  --  AtTRM82; TRM82
6 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1
7 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B
8 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1
9 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1
10 AT3G03960  --  has similar expression pattern (mutual information value=1.16544) with  --  AtCBF5; AtNAP57; CBF5; NAP57
11 AT3G03960  --  has similar expression pattern (mutual information value=1.01445) with  --  AT5G27330
12 AT3G03960  --  interacts with  --  AT3G11830  --  interacts with  --  JAZ1
13 AT3G03960  --  interacts with  --  AT1G24510  --  has similar expression pattern (mutual information value=0.842078) with  --  ATRBP47A; RBP47A
14 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.822822) with  --  AT2G33840
15 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.822822) with  --  AT1G28350
16 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.05641) with  --  AT2G39390
17 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.829737) with  --  AT2G27730
18 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0274) with  --  AT1G08580
19 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.02684) with  --  AT2G25210
20 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.29902) with  --  AT1G64880
21 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.20654) with  --  AT1G73940
22 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.864763) with  --  AT1G77750
23 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=0.988972) with  --  AT3G16780
24 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G08520
25 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT2G40205
26 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G56020
27 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.0375) with  --  AT3G11120
28 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.11077) with  --  AT3G12390
29 AT3G03960  --  has similar expression pattern (mutual information value=1.03676) with  --  AT2G32060  --  has similar expression pattern (mutual information value=1.18918) with  --  AT5G47210
30 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.871774) with  --  ATBBD1; BBD1
31 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.828231) with  --  ATMYBL2; MYBL2
32 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.86279) with  --  AT3G19900
33 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.941007) with  --  AT1G55000
34 AT3G03960  --  has similar expression pattern (mutual information value=0.878479) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.97609) with  --  WCRKC1
35 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
36 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.00864) with  --  EDA13; EDA19; SWA1
37 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.826887) with  --  AT2G18220
38 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.11725) with  --  AT1G79470
39 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.01164) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
40 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.826806) with  --  AT3G23940
41 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.816373) with  --  ATEIF2-A2; EIF2 ALPHA; EIF2-A2
42 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.982191) with  --  AT5G14580
43 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.888908) with  --  AT5G54910
44 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.869488) with  --  OLI2
45 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.00526) with  --  PNM1
46 AT3G03960  --  has similar expression pattern (mutual information value=1.01362) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.857591) with  --  AT5G62440
47 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT4G31985
48 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT5G26720
49 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  EMB3010; RPS6B
50 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  NAP1;3; NFA03; NFA3
51 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT3G02190
52 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  NAP1;2; NFA02; NFA2
53 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT2G24090
54 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT2G45860
55 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  IBH1
56 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT1G30880
57 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT1G54120
58 AT3G03960  --  has similar expression pattern (mutual information value=0.838129) with  --  ATNAP1;1; NAP1;1  --  is the target gene of  --  ath-miR414
59 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  interacts with  --  AT5G13810
60 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.14093) with  --  AT1G60770
61 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=0.985245) with  --  AT1G09590
62 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=0.985245) with  --  AT1G09690
63 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.14003) with  --  ATPRMT10; PRMT10
64 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.18563) with  --  AT3G06040
65 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.04486) with  --  AT3G22660
66 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=0.964972) with  --  AT4G27090
67 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.1071) with  --  AT4G31810
68 AT3G03960  --  has similar expression pattern (mutual information value=1.00675) with  --  NFD1  --  has similar expression pattern (mutual information value=1.19565) with  --  emb2474; TIM9
69 AT3G03960  --  has similar expression pattern (mutual information value=1.16544) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  interacts with  --  ATPOT1; AtPOT1a
70 AT3G03960  --  has similar expression pattern (mutual information value=1.16544) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  has similar expression pattern (mutual information value=1.00498) with  --  ATKRS-1
71 AT3G03960  --  has similar expression pattern (mutual information value=1.16544) with  --  AtCBF5; AtNAP57; CBF5; NAP57  --  has similar expression pattern (mutual information value=0.946314) with  --  ATPRMT4B; PRMT4B
72 AT3G03960  --  has similar expression pattern (mutual information value=1.01445) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.884269) with  --  AT5G33300
73 AT3G03960  --  has similar expression pattern (mutual information value=1.01445) with  --  AT5G27330  --  has similar expression pattern (mutual information value=0.906831) with  --  AT5G13520
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