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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G01160
Type: Protein GRN ID: np28342 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink).
Gene Locus: AT3G01160
Gene Expression (Affy ATH1 probeset): 259278_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357
3 AT3G01160  --  has similar expression pattern (mutual information value=0.819102) with  --  HEN2
4 AT3G01160  --  has similar expression pattern (mutual information value=0.978481) with  --  ATNAF1; NAF1
5 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720
6 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5
7 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42
8 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660
9 AT3G01160  --  has similar expression pattern (mutual information value=0.865592) with  --  AT3G15080
10 AT3G01160  --  has similar expression pattern (mutual information value=1.01765) with  --  AT4G02400
11 AT3G01160  --  has similar expression pattern (mutual information value=0.978158) with  --  AT4G25730
12 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1
13 AT3G01160  --  has similar expression pattern (mutual information value=0.920189) with  --  AT5G06110
14 AT3G01160  --  has similar expression pattern (mutual information value=0.842135) with  --  AT5G17930
15 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3
16 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.992377) with  --  AT1G13160
17 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=1.12237) with  --  ATPRMT10; PRMT10
18 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=1.08496) with  --  EMB2777
19 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.983224) with  --  ATKRS-1
20 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.886672) with  --  AT3G52170
21 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=1.17506) with  --  emb1796
22 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.858743) with  --  AT5G35910
23 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.826154) with  --  EMB3012
24 AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357  --  has similar expression pattern (mutual information value=0.811512) with  --  AT4G16630
25 AT3G01160  --  has similar expression pattern (mutual information value=0.819102) with  --  HEN2  --  has similar expression pattern (mutual information value=0.821896) with  --  AT2G47790
26 AT3G01160  --  has similar expression pattern (mutual information value=0.819102) with  --  HEN2  --  has similar expression pattern (mutual information value=0.837053) with  --  AT5G15610
27 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.941349) with  --  AT2G18220
28 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.882986) with  --  AT1G79150
29 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.974177) with  --  AT2G24990
30 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.974177) with  --  AT5G37350
31 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.896826) with  --  AT1G23280
32 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.828276) with  --  AT1G50920
33 AT3G01160  --  has similar expression pattern (mutual information value=1.08218) with  --  AT1G06720  --  has similar expression pattern (mutual information value=0.839603) with  --  AT5G62440
34 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.971681) with  --  AT1G60770
35 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.94728) with  --  AT3G16780
36 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.827342) with  --  AT1G66530
37 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.97433) with  --  AT3G12390
38 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.975199) with  --  AT4G10480
39 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.924278) with  --  NACA3
40 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.895434) with  --  PNM1
41 AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5  --  has similar expression pattern (mutual information value=0.828994) with  --  AT5G26710
42 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  interacts with  --  CERK1; LYSM RLK1
43 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.15489) with  --  AT2G19385
44 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.11735) with  --  AT2G34260
45 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT1G63250
46 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT2G07750
47 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.927653) with  --  OWL1
48 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.833735) with  --  ATHB54; HB54
49 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06745) with  --  ATRRP4; RRP4
50 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.986862) with  --  AT1G14060
51 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  MEE67
52 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  AT1G18320
53 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.889835) with  --  AT1G04945
54 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.841373) with  --  AT1G13810
55 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.05335) with  --  AT3G07750
56 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.883673) with  --  AT3G01800
57 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.854645) with  --  TPR10
58 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.979273) with  --  RPL3P
59 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.942047) with  --  AT3G13940
60 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04903) with  --  ATPRMT3; PRMT3
61 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.867627) with  --  AT1G16740
62 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04556) with  --  AT4G01990
63 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.866615) with  --  AT4G31790
64 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06093) with  --  AT3G55605
65 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.02232) with  --  AT5G09840
66 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.23679) with  --  AT5G38720
67 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.831492) with  --  AT5G39840
68 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.804921) with  --  AT5G48240
69 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.03154) with  --  RID2
70 AT3G01160  --  has similar expression pattern (mutual information value=0.91287) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.826464) with  --  CYCH;1
71 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.02202) with  --  AT2G18520
72 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.944284) with  --  TIM13
73 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.867551) with  --  AT1G02370
74 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.04464) with  --  AT3G10090
75 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.874656) with  --  AT3G19360
76 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.02449) with  --  AT1G71850
77 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.04486) with  --  NFD1
78 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.03524) with  --  emb2474; TIM9
79 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.964456) with  --  AT3G49890
80 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.907455) with  --  ATEIF2-A2; EIF2 ALPHA; EIF2-A2
81 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.801764) with  --  BOB1
82 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.05712) with  --  AT5G57120
83 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.18762) with  --  GR-RBP3
84 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.09435) with  --  AT5G61310
85 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=1.02492) with  --  AT5G26110
86 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  has similar expression pattern (mutual information value=0.974278) with  --  AT4G37090
87 AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660  --  is the target gene of  --  ath-miR5634
88 AT3G01160  --  has similar expression pattern (mutual information value=0.865592) with  --  AT3G15080  --  has similar expression pattern (mutual information value=0.846391) with  --  AT2G25355
89 AT3G01160  --  has similar expression pattern (mutual information value=1.01765) with  --  AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880
90 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.81952) with  --  AtELP2; ELP2
91 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=1.00018) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
92 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.840935) with  --  EMB2788
93 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.871568) with  --  RBL
94 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.94799) with  --  AT5G11240
95 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.80261) with  --  AT5G22840
96 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.841895) with  --  NRPC2
97 AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1  --  has product (in catalytic reaction)  --  RNA
98 AT3G01160  --  has similar expression pattern (mutual information value=0.920189) with  --  AT5G06110  --  has similar expression pattern (mutual information value=0.819132) with  --  AT5G14440
99 AT3G01160  --  has similar expression pattern (mutual information value=0.842135) with  --  AT5G17930  --  has similar expression pattern (mutual information value=0.816355) with  --  AT1G13120
100 AT3G01160  --  has similar expression pattern (mutual information value=0.842135) with  --  AT5G17930  --  has similar expression pattern (mutual information value=0.806006) with  --  AT3G15590
101 AT3G01160  --  has similar expression pattern (mutual information value=0.842135) with  --  AT5G17930  --  has similar expression pattern (mutual information value=0.84874) with  --  EMB1706; MTA
102 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  has similar expression pattern (mutual information value=0.910641) with  --  AT2G25670
103 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  has similar expression pattern (mutual information value=0.901343) with  --  AT3G02760
104 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  has similar expression pattern (mutual information value=0.883776) with  --  ATRBP47B; RBP47B
105 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  has similar expression pattern (mutual information value=0.844441) with  --  AT4G25210
106 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  has similar expression pattern (mutual information value=1.08974) with  --  AT5G50310
107 AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3  --  is the target gene of  --  ath-miR4239
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