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Location:  Home > Details for node AT4G31985
Type: Protein GRN ID: np34330 Name:
Annotation: Ribosomal protein L39 family protein
Gene Locus: AT4G31985
Gene Expression (Affy ATH1 probeset): 253482_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3
3 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1
4 AT4G31985  --  has similar expression pattern (mutual information value=0.973936) with  --  SNRNP-G
5 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1
6 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700
7 AT4G31985  --  has similar expression pattern (mutual information value=0.823987) with  --  AT3G49100
8 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840
9 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440
10 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3  --  has similar expression pattern (mutual information value=0.901442) with  --  AT3G07050
11 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3  --  interacts with  --  AT1G08580
12 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3  --  interacts with  --  EMB3010; RPS6B
13 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3  --  interacts with  --  IBH1
14 AT4G31985  --  interacts with  --  NAP1;3; NFA03; NFA3  --  interacts with  --  AT2G45860
15 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT5G26720
16 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  interacts with  --  NAP1;2; NFA02; NFA2
17 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT2G24090
18 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT1G30880
19 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  interacts with  --  AT1G54120
20 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  has similar expression pattern (mutual information value=0.838129) with  --  AT3G03960
21 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  has similar expression pattern (mutual information value=0.928359) with  --  NFD1
22 AT4G31985  --  interacts with  --  ATNAP1;1; NAP1;1  --  is the target gene of  --  ath-miR414
23 AT4G31985  --  has similar expression pattern (mutual information value=0.973936) with  --  SNRNP-G  --  has similar expression pattern (mutual information value=0.80826) with  --  NRPB6B; NRPE6B
24 AT4G31985  --  has similar expression pattern (mutual information value=0.973936) with  --  SNRNP-G  --  has similar expression pattern (mutual information value=0.82155) with  --  AT5G56710
25 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  interacts with  --  ATNAP5; NAP5
26 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.883579) with  --  AT2G39390
27 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.971306) with  --  AT2G18400
28 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.983001) with  --  AT1G64880
29 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.971319) with  --  AT3G59650
30 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G58990
31 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G52370
32 AT4G31985  --  has similar expression pattern (mutual information value=0.83145) with  --  PFD1  --  has similar expression pattern (mutual information value=1.07201) with  --  AT5G64670
33 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=0.940406) with  --  AT2G19730
34 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09590
35 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=1.43663) with  --  AT1G09690
36 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=1.13948) with  --  AT1G73940
37 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=1.23715) with  --  AT3G10090
38 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G23390
39 AT4G31985  --  has similar expression pattern (mutual information value=0.936794) with  --  AT3G06700  --  has similar expression pattern (mutual information value=1.47761) with  --  AT3G60245
40 AT4G31985  --  has similar expression pattern (mutual information value=0.823987) with  --  AT3G49100  --  interacts with  --  AT2G43640
41 AT4G31985  --  has similar expression pattern (mutual information value=0.823987) with  --  AT3G49100  --  has similar expression pattern (mutual information value=0.807771) with  --  ATTOM22-I; TOM22-I
42 AT4G31985  --  has similar expression pattern (mutual information value=0.823987) with  --  AT3G49100  --  has similar expression pattern (mutual information value=0.847737) with  --  AT2G31725
43 AT4G31985  --  has similar expression pattern (mutual information value=0.823987) with  --  AT3G49100  --  has similar expression pattern (mutual information value=0.816291) with  --  AT3G62810
44 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.923896) with  --  AT2G45520
45 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.989288) with  --  AT2G25720
46 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=1.10507) with  --  AT1G65700
47 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.905075) with  --  AT1G11240
48 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.872352) with  --  AT1G63980
49 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.83785) with  --  AT3G05070
50 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.849823) with  --  HMGB5; HMGD; NFD05; NFD5
51 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.981491) with  --  AT5G39800
52 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.981491) with  --  AT5G40080
53 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=1.09648) with  --  AT5G42060
54 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=1.05342) with  --  ATDSS1(V); DSS1(V)
55 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.965552) with  --  NRPB6A; NRPD6A; NRPE6A
56 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=0.848218) with  --  AT5G16060
57 AT4G31985  --  has similar expression pattern (mutual information value=0.854775) with  --  AT3G62840  --  has similar expression pattern (mutual information value=1.03857) with  --  AT4G37090
58 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.848281) with  --  AT1G79470
59 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.857591) with  --  HSP60; HSP60-3B
60 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.971884) with  --  TOM40
61 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.973889) with  --  AT5G06550
62 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G23250
63 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.907448) with  --  RID2
64 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.08756) with  --  AT1G23100
65 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.14956) with  --  AT1G04480
66 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.923102) with  --  AT1G23280
67 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.814196) with  --  AT1G01940
68 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.839603) with  --  AT1G06720
69 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.816413) with  --  AT1G73180
70 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.813809) with  --  AT3G06680
71 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.10756) with  --  AT3G22660
72 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.35766) with  --  AT4G05400
73 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.15764) with  --  emb2474; TIM9
74 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.02641) with  --  AT3G57000
75 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.17287) with  --  PNM1
76 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.04009) with  --  ATEBP1; ATG2; EBP1
77 AT4G31985  --  has similar expression pattern (mutual information value=0.850719) with  --  AT5G62440  --  interacts with  --  ARR5
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