Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATTOPII; TOPII
Type: Protein GRN ID: np28543 Name: ATTOPII; TOPII
Annotation: TOPII, ATTOPII | topoisomerase II
Gene Locus: AT3G23890
Gene Expression (Affy ATH1 probeset): 256864_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1
3 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2
4 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.953022) with  --  AT2G22610
5 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G05440
6 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310
7 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.02623) with  --  KINESIN-12B; PAKRP1L
8 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.964732) with  --  AT3G20150
9 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800
10 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.944669) with  --  AT4G26660
11 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050
12 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280
13 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2
14 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.93224) with  --  AT3G51720
15 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3
16 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.04949) with  --  AT5G55520
17 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.987265) with  --  AT5G60930
18 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.05321) with  --  AT5G62550
19 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160
20 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1
21 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ICK5; ICN6; KRP7
22 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ACK1; ICK4; KRP6
23 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ACK2; ICK7; KRP4; KRP4
24 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ICK6; KRP3
25 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCH;1
26 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD6;1
27 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD3;2
28 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCB3;1
29 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCB2;3
30 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCB2;1
31 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA3;4
32 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA3;1
33 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA2;4
34 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYC2BAT; CYC3B; CYCA2;2
35 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA2;1
36 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA1;1
37 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  AT1G67580
38 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CAK1AT; CDKF;1
39 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ATCDK8; CDKE;1; HEN3
40 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  AT;CDCKD;3; CAK2AT; CDKD1;3
41 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2
42 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CDKB2;2
43 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CDKB2;1
44 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CKS2
45 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ICK3; KRP5
46 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD3;3
47 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ATCYCD2;1; CYCD2;1
48 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD5;1
49 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD4;2
50 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCA2;3
51 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CKS1; CKS1AT
52 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCD4;1
53 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ATCYCD1;1; CYCD1;1
54 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCP1;1
55 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  AT3G57400
56 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  RLK
57 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  interacts with  --  ATSUC2; SUC2; SUT1
58 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  modify  --  ICK2; KRP2
59 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1  --  modify  --  ATMAP65-1; MAP65-1; MAP65-1
60 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2  --  interacts with  --  ICK1; KRP1
61 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2  --  interacts with  --  ATE2FA; E2F3
62 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2  --  interacts with  --  CYC1; CYCB1; CYCB1;1
63 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310  --  has similar expression pattern (mutual information value=0.801349) with  --  ATMAP65-3; MAP65-3; PLE
64 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.02623) with  --  KINESIN-12B; PAKRP1L  --  has similar expression pattern (mutual information value=0.834731) with  --  AT1G63100
65 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.02623) with  --  KINESIN-12B; PAKRP1L  --  interacts with  --  FU
66 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.27701) with  --  ATSYP111; KN; SYP111
67 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.20475) with  --  ATNACK1; HIK; NACK1
68 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.10072) with  --  AT3G15550
69 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.805736) with  --  AT4G28230
70 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.944669) with  --  AT4G26660  --  is the target gene of  --  ath-miR5029
71 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050  --  has similar expression pattern (mutual information value=1.02197) with  --  POK1
72 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050  --  has similar expression pattern (mutual information value=0.816528) with  --  AT3G57060
73 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050  --  has similar expression pattern (mutual information value=0.853017) with  --  AT5G33300
74 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050  --  is the target gene of  --  ath-miR832-3p
75 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.946889) with  --  AT2G28620
76 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.983756) with  --  AT3G03130
77 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.82188) with  --  AT4G02800
78 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2  --  interacts with  --  AT5G25930
79 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2  --  interacts with  --  SCM; SRF9; SUB
80 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2  --  is modified by  --  ATMPK8; MPK8
81 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3  --  interacts with  --  PYM; UVI4
82 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3  --  interacts with  --  OSD1; UVI4-LIKE
83 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3  --  interacts with  --  CYCA1; CYCA1;2; DYP; TAM
84 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3  --  has similar expression pattern (mutual information value=0.895288) with  --  CDC20.1
85 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3  --  has similar expression pattern (mutual information value=0.895288) with  --  CDC20.2
86 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.04949) with  --  AT5G55520  --  has similar expression pattern (mutual information value=1.02804) with  --  AT5G45700
87 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.918327) with  --  CYCB1;4
88 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.914346) with  --  CYCB2;4
89 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.834694) with  --  ATK5
90 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.913595) with  --  AT4G15830
91 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.914313) with  --  MCM5
92 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.862323) with  --  MCM4
93 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.814859) with  --  UBC20
94 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2
95 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.823027) with  --  AT5G15510
96 ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact