Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G15550
Type: Protein GRN ID: np28239 Name:
Annotation: unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink).
Gene Locus: AT3G15550
Gene Expression (Affy ATH1 probeset): 258387_at    257290_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1
3 AT3G15550  --  has similar expression pattern (mutual information value=0.876755) with  --  AT1G63100
4 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800
5 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2
6 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=1.2194) with  --  ATSYP111; KN; SYP111
7 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.910938) with  --  AT2G28620
8 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.848824) with  --  AT4G02800
9 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.861234) with  --  CDC20.1
10 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.861234) with  --  CDC20.2
11 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=1.46212) with  --  AT3G51280
12 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  interacts with  --  ANP1; MAPKKK1; NP1
13 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  interacts with  --  ATSUC1; SUC1
14 AT3G15550  --  has similar expression pattern (mutual information value=1.00989) with  --  ATNACK1; HIK; NACK1  --  is the target gene of  --  ath-miR779.2
15 AT3G15550  --  has similar expression pattern (mutual information value=0.876755) with  --  AT1G63100  --  has similar expression pattern (mutual information value=0.834731) with  --  KINESIN-12B; PAKRP1L
16 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.873363) with  --  AT2G22610
17 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.940887) with  --  AT3G10310
18 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.957478) with  --  AT3G20150
19 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.17005) with  --  ATTOPII; TOPII
20 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.805736) with  --  AT4G28230
21 AT3G15550  --  has similar expression pattern (mutual information value=1.10072) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.16029) with  --  AT5G55520
22 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2  --  interacts with  --  AT5G25930
23 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2  --  interacts with  --  SCM; SRF9; SUB
24 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2  --  has similar expression pattern (mutual information value=0.922259) with  --  CDC2B; CDKB1;1
25 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2  --  has similar expression pattern (mutual information value=0.922259) with  --  CDKB1;2
26 AT3G15550  --  has similar expression pattern (mutual information value=0.923467) with  --  IMK2  --  is modified by  --  ATMPK8; MPK8
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact