Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node CYCD4;2
Type: Protein GRN ID: np38122 Name: CYCD4;2
Annotation: CYCD4;2 | cyclin d4;2
Gene Locus: AT5G10440
Gene Expression (Affy ATH1 probeset): 250431_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7
3 CYCD4;2  --  interacts with  --  ACK1; ICK4; KRP6
4 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4
5 CYCD4;2  --  interacts with  --  ICK6; KRP3
6 CYCD4;2  --  interacts with  --  ICK2; KRP2
7 CYCD4;2  --  interacts with  --  DEL2; E2FD; E2L1
8 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1
9 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2
10 CYCD4;2  --  interacts with  --  ICK3; KRP5
11 CYCD4;2  --  interacts with  --  ICK1; KRP1
12 CYCD4;2  --  interacts with  --  CKS2
13 CYCD4;2  --  interacts with  --  CKS1; CKS1AT
14 CYCD4;2  --  interacts with  --  AT1G67580
15 CYCD4;2  --  interacts with  --  ATCDK8; CDKE;1; HEN3
16 CYCD4;2  --  interacts with  --  AT;CDKD;1; CAK3AT; CDKD1;1
17 CYCD4;2  --  interacts with  --  CDKB2;1
18 CYCD4;2  --  interacts with  --  CDKB1;2
19 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1
20 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CYCH;1
21 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CYCD6;1
22 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CYCD5;1
23 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CYCD3;3
24 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  ATCYCD1;1; CYCD1;1
25 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CYCD4;1
26 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  RKP
27 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  CDKB2;2
28 CYCD4;2  --  interacts with  --  ICK5; ICN6; KRP7  --  interacts with  --  AT;CDCKD;3; CAK2AT; CDKD1;3
29 CYCD4;2  --  interacts with  --  ACK1; ICK4; KRP6  --  interacts with  --  CYCD3; CYCD3;1
30 CYCD4;2  --  interacts with  --  ACK1; ICK4; KRP6  --  interacts with  --  ATCYCD2;1; CYCD2;1
31 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCD3;2
32 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCA3;4
33 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCA3;2
34 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCA3;1
35 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCA2;4
36 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  interacts with  --  CYCA1;1
37 CYCD4;2  --  interacts with  --  ACK2; ICK7; KRP4; KRP4  --  has similar expression pattern (mutual information value=0.838466) with  --  SBI1
38 CYCD4;2  --  interacts with  --  ICK6; KRP3  --  interacts with  --  CYC2BAT; CYC3B; CYCA2;2
39 CYCD4;2  --  interacts with  --  ICK2; KRP2  --  interacts with  --  ABP; ABP1
40 CYCD4;2  --  interacts with  --  ICK2; KRP2  --  interacts with  --  CPR5; HYS1
41 CYCD4;2  --  interacts with  --  ICK2; KRP2  --  interacts with  --  AT1G55890
42 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT2G21237
43 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AT4G16444
44 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  AKIN11; ATKIN11; KIN11; SNRK1.2
45 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  ATDPB; DPB
46 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DPA
47 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DEL3; E2FF; E2L2
48 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  interacts with  --  DEL1; E2FE; E2L3
49 CYCD4;2  --  interacts with  --  CAK1AT; CDKF;1  --  modify  --  MED22B
50 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  interacts with  --  ATE2FA; E2F3
51 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  interacts with  --  AT3G21140
52 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  interacts with  --  CYCB3;1
53 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  interacts with  --  CYC2; CYCB1;3
54 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  interacts with  --  CYCA2;3
55 CYCD4;2  --  interacts with  --  AT;CDKD;2; CAK4; CAK4AT; CDKD1;2; CDKD;2  --  is modified by  --  ATWEE1; WEE1
56 CYCD4;2  --  interacts with  --  CKS2  --  interacts with  --  FZR3
57 CYCD4;2  --  interacts with  --  CKS2  --  interacts with  --  NDL1
58 CYCD4;2  --  interacts with  --  CKS2  --  interacts with  --  AT4G14310
59 CYCD4;2  --  interacts with  --  CKS2  --  has similar expression pattern (mutual information value=0.818974) with  --  HTA11
60 CYCD4;2  --  interacts with  --  CKS1; CKS1AT  --  interacts with  --  CYCB1;4
61 CYCD4;2  --  interacts with  --  ATCDK8; CDKE;1; HEN3  --  interacts with  --  CYCA2;1
62 CYCD4;2  --  interacts with  --  ATCDK8; CDKE;1; HEN3  --  interacts with  --  AT5G51910
63 CYCD4;2  --  interacts with  --  ATCDK8; CDKE;1; HEN3  --  interacts with  --  HINT1; HIT3
64 CYCD4;2  --  interacts with  --  CDKB2;1  --  interacts with  --  CYC1; CYCB1; CYCB1;1
65 CYCD4;2  --  interacts with  --  CDKB2;1  --  interacts with  --  CYCB2;1
66 CYCD4;2  --  interacts with  --  CDKB2;1  --  interacts with  --  ATCSLC04; ATCSLC4; CSLC04; CSLC04; CSLC4
67 CYCD4;2  --  interacts with  --  CDKB2;1  --  interacts with  --  AT3G07680
68 CYCD4;2  --  interacts with  --  CDKB2;1  --  interacts with  --  CYCP2;1
69 CYCD4;2  --  interacts with  --  CDKB2;1  --  has similar expression pattern (mutual information value=0.886237) with  --  ATK5
70 CYCD4;2  --  interacts with  --  CDKB2;1  --  has similar expression pattern (mutual information value=0.99242) with  --  AtAUR1; AUR1
71 CYCD4;2  --  interacts with  --  CDKB2;1  --  has similar expression pattern (mutual information value=0.853919) with  --  AT5G17160
72 CYCD4;2  --  interacts with  --  CDKB2;1  --  has similar expression pattern (mutual information value=0.96373) with  --  AT4G15830
73 CYCD4;2  --  interacts with  --  CDKB1;2  --  has similar expression pattern (mutual information value=0.861266) with  --  ATTOPII; TOPII
74 CYCD4;2  --  interacts with  --  CDKB1;2  --  has similar expression pattern (mutual information value=0.922259) with  --  IMK2
75 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1  --  interacts with  --  CYCP1;1
76 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1  --  interacts with  --  AT3G57400
77 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1  --  interacts with  --  RLK
78 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1  --  interacts with  --  ATSUC2; SUC2; SUT1
79 CYCD4;2  --  interacts with  --  CDC2B; CDKB1;1  --  modify  --  ATMAP65-1; MAP65-1; MAP65-1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact