Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G51280
Type: Protein GRN ID: np28415 Name:
Annotation: Tetratricopeptide repeat (TPR)-like superfamily protein
Gene Locus: AT3G51280
Gene Expression (Affy ATH1 probeset): 252148_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111
3 AT3G51280  --  has similar expression pattern (mutual information value=0.946889) with  --  AT2G28620
4 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1
5 AT3G51280  --  has similar expression pattern (mutual information value=0.884386) with  --  AT1G63100
6 AT3G51280  --  has similar expression pattern (mutual information value=0.983756) with  --  AT3G03130
7 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII
8 AT3G51280  --  has similar expression pattern (mutual information value=0.82188) with  --  AT4G02800
9 AT3G51280  --  has similar expression pattern (mutual information value=1.25119) with  --  AT4G23800
10 AT3G51280  --  has similar expression pattern (mutual information value=0.921766) with  --  IMK2
11 AT3G51280  --  has similar expression pattern (mutual information value=0.884969) with  --  AT3G51720
12 AT3G51280  --  has similar expression pattern (mutual information value=1.12948) with  --  AT5G55520
13 AT3G51280  --  has similar expression pattern (mutual information value=0.881109) with  --  AT5G17160
14 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1
15 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATCPK1; CPK1
16 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  interacts with  --  KEU
17 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP30; SNAP30
18 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP29; SNAP29
19 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP33; ATSNAP33B; SNAP33; SNP33
20 AT3G51280  --  has similar expression pattern (mutual information value=1.32399) with  --  ATSYP111; KN; SYP111  --  has similar expression pattern (mutual information value=1.08873) with  --  AT5G45700
21 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=1.00989) with  --  AT3G15550
22 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.861234) with  --  CDC20.1
23 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  has similar expression pattern (mutual information value=0.861234) with  --  CDC20.2
24 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  interacts with  --  ANP1; MAPKKK1; NP1
25 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  interacts with  --  ATSUC1; SUC1
26 AT3G51280  --  has similar expression pattern (mutual information value=1.46212) with  --  ATNACK1; HIK; NACK1  --  is the target gene of  --  ath-miR779.2
27 AT3G51280  --  has similar expression pattern (mutual information value=0.884386) with  --  AT1G63100  --  has similar expression pattern (mutual information value=0.834731) with  --  KINESIN-12B; PAKRP1L
28 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1
29 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2
30 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.953022) with  --  AT2G22610
31 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G05440
32 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310
33 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.964732) with  --  AT3G20150
34 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.944669) with  --  AT4G26660
35 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050
36 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3
37 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.987265) with  --  AT5G60930
38 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.05321) with  --  AT5G62550
39 AT3G51280  --  has similar expression pattern (mutual information value=1.20653) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1
40 AT3G51280  --  has similar expression pattern (mutual information value=0.82188) with  --  AT4G02800  --  has similar expression pattern (mutual information value=1.1884) with  --  AT3G02120
41 AT3G51280  --  has similar expression pattern (mutual information value=0.82188) with  --  AT4G02800  --  has similar expression pattern (mutual information value=1.11687) with  --  AT4G15830
42 AT3G51280  --  has similar expression pattern (mutual information value=1.25119) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.805736) with  --  AT4G28230
43 AT3G51280  --  has similar expression pattern (mutual information value=0.921766) with  --  IMK2  --  interacts with  --  AT5G25930
44 AT3G51280  --  has similar expression pattern (mutual information value=0.921766) with  --  IMK2  --  interacts with  --  SCM; SRF9; SUB
45 AT3G51280  --  has similar expression pattern (mutual information value=0.921766) with  --  IMK2  --  is modified by  --  ATMPK8; MPK8
46 AT3G51280  --  has similar expression pattern (mutual information value=0.881109) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.918327) with  --  CYCB1;4
47 AT3G51280  --  has similar expression pattern (mutual information value=0.881109) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.914346) with  --  CYCB2;4
48 AT3G51280  --  has similar expression pattern (mutual information value=0.881109) with  --  AT5G17160  --  has similar expression pattern (mutual information value=0.853919) with  --  CDKB2;1
49 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  interacts with  --  ACK2; ICK7; KRP4; KRP4
50 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  interacts with  --  CCS52A2; FZR1
51 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  interacts with  --  CCS52A1; FZR2
52 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  interacts with  --  ATCYCD1;1; CYCD1;1
53 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  interacts with  --  AT;CDCKD;3; CAK2AT; CDKD1;3
54 AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1  --  has similar expression pattern (mutual information value=0.808688) with  --  AT2G42110
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab