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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node UBC20
Type: Protein GRN ID: np16545 Name: UBC20
Annotation: UBC20 | ubiquitin-conjugating enzyme 20 [EC:6.3.2.19]
Gene Locus: AT1G50490
Gene Expression (Affy ATH1 probeset): 261859_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1
3 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.914313) with  --  MCM5
4 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.834375) with  --  AT2G22610
5 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.862323) with  --  MCM4
6 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2
7 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII
8 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.872948) with  --  AT3G51720
9 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.903721) with  --  MCM3
10 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.823027) with  --  AT5G15510
11 UBC20  --  has similar expression pattern (mutual information value=0.814859) with  --  ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p
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