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Location:  Home > Details for node AT5G55520
Type: Protein GRN ID: np41244 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Kinesin-related protein (InterPro:IPR010544); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26660.1); Has 32425 Blast hits to 20462 proteins in 1550 species: Archae - 335; Bacteria - 3392; Metazoa - 16996; Fungi - 2645; Plants - 1561; Viruses - 54; Other Eukaryotes - 7442 (source: NCBI BLink).
Gene Locus: AT5G55520
Gene Expression (Affy ATH1 probeset): 248057_at    
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 Protein modification
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 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111
3 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII
4 AT5G55520  --  has similar expression pattern (mutual information value=1.16029) with  --  AT4G23800
5 AT5G55520  --  has similar expression pattern (mutual information value=0.93364) with  --  AT4G26660
6 AT5G55520  --  has similar expression pattern (mutual information value=1.12948) with  --  AT3G51280
7 AT5G55520  --  has similar expression pattern (mutual information value=1.02804) with  --  AT5G45700
8 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATCPK1; CPK1
9 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  interacts with  --  KEU
10 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP30; SNAP30
11 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP29; SNAP29
12 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  interacts with  --  ATSNAP33; ATSNAP33B; SNAP33; SNP33
13 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  has similar expression pattern (mutual information value=1.2194) with  --  ATNACK1; HIK; NACK1
14 AT5G55520  --  has similar expression pattern (mutual information value=1.06825) with  --  ATSYP111; KN; SYP111  --  has similar expression pattern (mutual information value=0.841546) with  --  AT4G02800
15 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1
16 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2
17 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.953022) with  --  AT2G22610
18 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G05440
19 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310
20 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.02623) with  --  KINESIN-12B; PAKRP1L
21 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.964732) with  --  AT3G20150
22 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050
23 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2
24 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.93224) with  --  AT3G51720
25 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3
26 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.987265) with  --  AT5G60930
27 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.05321) with  --  AT5G62550
28 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160
29 AT5G55520  --  has similar expression pattern (mutual information value=1.04949) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1
30 AT5G55520  --  has similar expression pattern (mutual information value=1.16029) with  --  AT4G23800  --  has similar expression pattern (mutual information value=1.10072) with  --  AT3G15550
31 AT5G55520  --  has similar expression pattern (mutual information value=1.16029) with  --  AT4G23800  --  has similar expression pattern (mutual information value=0.805736) with  --  AT4G28230
32 AT5G55520  --  has similar expression pattern (mutual information value=0.93364) with  --  AT4G26660  --  is the target gene of  --  ath-miR5029
33 AT5G55520  --  has similar expression pattern (mutual information value=1.12948) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.946889) with  --  AT2G28620
34 AT5G55520  --  has similar expression pattern (mutual information value=1.12948) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.884386) with  --  AT1G63100
35 AT5G55520  --  has similar expression pattern (mutual information value=1.12948) with  --  AT3G51280  --  has similar expression pattern (mutual information value=0.983756) with  --  AT3G03130
36 AT5G55520  --  has similar expression pattern (mutual information value=1.12948) with  --  AT3G51280  --  has similar expression pattern (mutual information value=1.26432) with  --  CYCA1;1
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