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Location:  Home > Details for node ORTH2; VIM1
Type: Protein GRN ID: np13220 Name: ORTH2; VIM1
Annotation: VIM1, ORTH2 | Zinc finger (C3HC4-type RING finger) family protein [TCDB:5.B.1.2] [TCDB:9.A.14.1] [EC:6.3.2.19]
Gene Locus: AT1G57820
Transcription factor /
transcriptional regulator:		 chromatin regulator family PHD
Gene Expression (Affy ATH1 probeset): 245828_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p
3 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.914313) with  --  MCM5
4 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.834375) with  --  AT2G22610
5 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.862323) with  --  MCM4
6 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.814859) with  --  UBC20
7 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2
8 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII
9 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.872948) with  --  AT3G51720
10 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.903721) with  --  MCM3
11 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.823027) with  --  AT5G15510
12 ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p  --  inhibit the expression of  --  AT5G08695
13 ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p  --  inhibit the expression of  --  AT5G08490
14 ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p  --  inhibit the expression of  --  AESP; ESP; ESP; RSW4
15 ORTH2; VIM1  --  is the target gene of  --  ath-miR3440b-5p  --  inhibit the expression of  --  ATMBD9; MBD9
16 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.914313) with  --  MCM5  --  has similar expression pattern (mutual information value=0.882912) with  --  ATORC1A; ORC1A
17 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.834375) with  --  AT2G22610  --  has similar expression pattern (mutual information value=0.889442) with  --  KINESIN-12B; PAKRP1L
18 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.834375) with  --  AT2G22610  --  has similar expression pattern (mutual information value=0.873363) with  --  AT4G23800
19 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2  --  has similar expression pattern (mutual information value=0.843691) with  --  ATPCNA2; PCNA2
20 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2  --  is the target gene of  --  ath-miR781b
21 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.82514) with  --  ATMCM2; MCM2  --  is the target gene of  --  ath-miR781a
22 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1
23 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2
24 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G05440
25 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310
26 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.964732) with  --  AT3G20150
27 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.944669) with  --  AT4G26660
28 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050
29 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280
30 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2
31 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3
32 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.04949) with  --  AT5G55520
33 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.987265) with  --  AT5G60930
34 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.05321) with  --  AT5G62550
35 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.898305) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160
36 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.872948) with  --  AT3G51720  --  has similar expression pattern (mutual information value=0.855179) with  --  CYCA1;1
37 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.903721) with  --  MCM3  --  has similar expression pattern (mutual information value=0.806327) with  --  AT5G52950
38 ORTH2; VIM1  --  has similar expression pattern (mutual information value=0.903721) with  --  MCM3  --  is the target gene of  --  ath-miR863-5p
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