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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G62550
Type: Protein GRN ID: np38544 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink).
Gene Locus: AT5G62550
Gene Expression (Affy ATH1 probeset): 247425_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII
3 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230
4 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDC2B; CDKB1;1
5 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.861266) with  --  CDKB1;2
6 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.953022) with  --  AT2G22610
7 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G05440
8 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.929245) with  --  AT3G10310
9 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.02623) with  --  KINESIN-12B; PAKRP1L
10 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.964732) with  --  AT3G20150
11 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.17005) with  --  AT4G23800
12 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.944669) with  --  AT4G26660
13 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.85823) with  --  AT3G44050
14 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.20653) with  --  AT3G51280
15 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.859135) with  --  IMK2
16 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.93224) with  --  AT3G51720
17 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.908827) with  --  FZR3
18 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=1.04949) with  --  AT5G55520
19 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.987265) with  --  AT5G60930
20 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.814024) with  --  AT5G17160
21 AT5G62550  --  has similar expression pattern (mutual information value=1.05321) with  --  ATTOPII; TOPII  --  has similar expression pattern (mutual information value=0.898305) with  --  ORTH2; VIM1
22 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  TOPP6
23 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  AT4G39050
24 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  AT1G30860
25 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  CYCA2;3
26 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  AT4G01090
27 AT5G62550  --  has similar expression pattern (mutual information value=0.86988) with  --  AT4G28230  --  interacts with  --  AT1G80000
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