Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G18740
Type: Protein GRN ID: np20117 Name:
Annotation: Small nuclear ribonucleoprotein family protein
Gene Locus: AT2G18740
Gene Expression (Affy ATH1 probeset): 266074_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G18740  --  interacts with  --  RUXF
3 AT2G18740  --  interacts with  --  AT5G57860
4 AT2G18740  --  interacts with  --  AT3G59810
5 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390
6 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860
7 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670
8 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1
9 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880
10 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G08520
11 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT2G40205
12 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G56020
13 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G11120
14 AT2G18740  --  has similar expression pattern (mutual information value=0.817003) with  --  AT4G03180
15 AT2G18740  --  interacts with  --  RUXF  --  interacts with  --  ATB BETA
16 AT2G18740  --  interacts with  --  RUXF  --  interacts with  --  AT4G24840
17 AT2G18740  --  interacts with  --  RUXF  --  has similar expression pattern (mutual information value=0.951584) with  --  TIM8
18 AT2G18740  --  interacts with  --  AT5G57860  --  interacts with  --  AT5G59140
19 AT2G18740  --  interacts with  --  AT5G57860  --  interacts with  --  AT5G66560
20 AT2G18740  --  interacts with  --  AT5G57860  --  interacts with  --  AT1G50280
21 AT2G18740  --  interacts with  --  AT5G57860  --  interacts with  --  AT1G14950
22 AT2G18740  --  interacts with  --  AT5G57860  --  interacts with  --  ATMYB67; ATY53; MYB67; MYB67
23 AT2G18740  --  interacts with  --  AT3G59810  --  interacts with  --  ATCSP3; CSP3
24 AT2G18740  --  interacts with  --  AT3G59810  --  interacts with  --  AT3G14080
25 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.05641) with  --  AT2G32060
26 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G18400
27 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.06562) with  --  AT1G09590
28 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.06562) with  --  AT1G09690
29 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.04747) with  --  AT2G25210
30 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.979336) with  --  AT1G73940
31 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.853651) with  --  AT1G77750
32 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.08005) with  --  AT3G06700
33 AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.918845) with  --  AT3G23390
34 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  interacts with  --  ATNAP1;1; NAP1;1
35 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  interacts with  --  NAP1;3; NFA03; NFA3
36 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  interacts with  --  NAP1;2; NFA02; NFA2
37 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  has similar expression pattern (mutual information value=0.935781) with  --  AT2G31725
38 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  has similar expression pattern (mutual information value=0.956369) with  --  rps15ae
39 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  has similar expression pattern (mutual information value=1.00433) with  --  AT5G61310
40 AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860  --  has similar expression pattern (mutual information value=0.907562) with  --  AT4G37090
41 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.928313) with  --  ATCSN2; COP12; CSN2; FUS12
42 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.89318) with  --  AT2G21290
43 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.812552) with  --  ATDSS1(I); DSS1(I)
44 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.811771) with  --  SYNC3
45 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.811771) with  --  EMB2755; SYNC1; SYNC1 ARATH
46 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.810898) with  --  AT3G03420
47 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.881518) with  --  AT3G02760
48 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT4G07950
49 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT1G01210
50 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.806248) with  --  AT5G05210
51 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.82045) with  --  AT5G50310
52 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.859534) with  --  AT5G57120
53 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.907667) with  --  PNM1
54 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.963472) with  --  AT5G64670
55 AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.910641) with  --  SDN3
56 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  interacts with  --  ATNAP5; NAP5
57 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  has similar expression pattern (mutual information value=0.843871) with  --  NRPB6B; NRPE6B
58 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  has similar expression pattern (mutual information value=0.83145) with  --  AT4G31985
59 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  has similar expression pattern (mutual information value=0.971319) with  --  AT3G59650
60 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G58990
61 AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G52370
62 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.832317) with  --  RIP3
63 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.06026) with  --  AT2G20710
64 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.03422) with  --  AT1G23100
65 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.11481) with  --  AT1G08580
66 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.0022) with  --  ATPRMT10; PRMT10
67 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.985475) with  --  APC13; BNS
68 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.02863) with  --  AT3G05130
69 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.08865) with  --  AT3G12390
70 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.828658) with  --  AT4G02400
71 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.987164) with  --  AT4G10480
72 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.874883) with  --  AT3G51730
73 AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.894667) with  --  PSL4
74 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G08520  --  has similar expression pattern (mutual information value=0.973459) with  --  AT4G22000
75 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G08520  --  has similar expression pattern (mutual information value=0.941209) with  --  AT4G17520
76 AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G11120  --  is the target gene of  --  ath-miR831
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact