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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G03180
Type: Protein GRN ID: np32022 Name:
Annotation: CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).
Gene Locus: AT4G03180
Gene Expression (Affy ATH1 probeset): 255434_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740
3 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670
4 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580
5 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290
6 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  interacts with  --  RUXF
7 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  interacts with  --  AT5G57860
8 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  interacts with  --  AT3G59810
9 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390
10 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=0.805333) with  --  AT2G45860
11 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=0.935689) with  --  PFD1
12 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=0.919876) with  --  AT1G64880
13 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G08520
14 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT2G40205
15 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G56020
16 AT4G03180  --  has similar expression pattern (mutual information value=0.817003) with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G11120
17 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.928313) with  --  ATCSN2; COP12; CSN2; FUS12
18 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.903949) with  --  AT2G25210
19 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.812552) with  --  ATDSS1(I); DSS1(I)
20 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.811771) with  --  SYNC3
21 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.811771) with  --  EMB2755; SYNC1; SYNC1 ARATH
22 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.810898) with  --  AT3G03420
23 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.881518) with  --  AT3G02760
24 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT4G07950
25 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT1G01210
26 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.806248) with  --  AT5G05210
27 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.82045) with  --  AT5G50310
28 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.859534) with  --  AT5G57120
29 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.907667) with  --  PNM1
30 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.963472) with  --  AT5G64670
31 AT4G03180  --  has similar expression pattern (mutual information value=0.887249) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.910641) with  --  SDN3
32 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  interacts with  --  NAP1;2; NFA02; NFA2
33 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  interacts with  --  NAP1;3; NFA03; NFA3
34 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  interacts with  --  AT5G55100
35 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.986696) with  --  AT2G44510
36 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.944193) with  --  AT2G34260
37 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.916981) with  --  MEE21
38 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.27001) with  --  AT2G32220
39 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.0274) with  --  AT2G32060
40 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.13516) with  --  AT1G23100
41 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.845872) with  --  AT1G01940
42 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.987124) with  --  AT3G10530
43 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.05021) with  --  AT1G16740
44 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.968231) with  --  AT4G30840
45 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.1709) with  --  emb2474; TIM9
46 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.0109) with  --  emb1796
47 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.16565) with  --  AT3G52040
48 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=0.871455) with  --  AT5G48240
49 AT4G03180  --  has similar expression pattern (mutual information value=0.974659) with  --  AT1G08580  --  has similar expression pattern (mutual information value=1.11569) with  --  AT5G61310
50 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290  --  has similar expression pattern (mutual information value=0.846398) with  --  AT1G11240
51 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290  --  has similar expression pattern (mutual information value=0.917781) with  --  rps15ae
52 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290  --  has similar expression pattern (mutual information value=0.896918) with  --  AT3G59650
53 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290  --  has similar expression pattern (mutual information value=1.02314) with  --  AT3G62810
54 AT4G03180  --  has similar expression pattern (mutual information value=0.837219) with  --  AT2G21290  --  has similar expression pattern (mutual information value=0.815627) with  --  NACA3
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