Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G59810
Type: Protein GRN ID: np26073 Name:
Annotation: Small nuclear ribonucleoprotein family protein
Gene Locus: AT3G59810
Gene Expression (Affy ATH1 probeset): 251447_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G59810  --  interacts with  --  AT4G30330
3 AT3G59810  --  interacts with  --  ATCSP3; CSP3
4 AT3G59810  --  interacts with  --  AT3G14080
5 AT3G59810  --  interacts with  --  AT2G18740
6 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860
7 AT3G59810  --  interacts with  --  AT4G30330  --  interacts with  --  AT1G24050
8 AT3G59810  --  interacts with  --  AT4G30330  --  interacts with  --  AT2G32840
9 AT3G59810  --  interacts with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.8832) with  --  PFD1
10 AT3G59810  --  interacts with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.931616) with  --  AT2G18400
11 AT3G59810  --  interacts with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.886683) with  --  AT1G64880
12 AT3G59810  --  interacts with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.931636) with  --  APC13; BNS
13 AT3G59810  --  interacts with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.967931) with  --  AT3G59650
14 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATGRP7; CCR2; GR-RBP7; GRP7
15 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  spl4
16 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  APRR7; PRR7
17 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G14415
18 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATSOS4; SOS4
19 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  NIC2
20 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G09690
21 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  FLA16
22 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SKIP
23 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ANNAT1; ATOXY5; OXY5
24 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ENO2; LOS2
25 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G05210
26 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G13590
27 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT2G37220
28 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PTAC16
29 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CRR31
30 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT1G28050
31 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PRH75
32 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  JR1
33 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G42050
34 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SVR3
35 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G32420
36 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G23390
37 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G65260
38 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATPABN1; PABN1
39 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G11200
40 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  DCP5
41 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G03920
42 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATAVP3; AtVHP1;1; AVP-3; AVP1
43 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G60980
44 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CP29
45 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G10970
46 AT3G59810  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATNUC-L1; NUC-L1; PARL1
47 AT3G59810  --  interacts with  --  AT3G14080  --  interacts with  --  JAZ1
48 AT3G59810  --  interacts with  --  AT2G18740  --  interacts with  --  AT5G57860
49 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G39390
50 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G25670
51 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G08520
52 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT2G40205
53 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G56020
54 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=1.19855) with  --  AT3G11120
55 AT3G59810  --  interacts with  --  AT2G18740  --  has similar expression pattern (mutual information value=0.817003) with  --  AT4G03180
56 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  interacts with  --  ATNAP1;1; NAP1;1
57 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  interacts with  --  NAP1;3; NFA03; NFA3
58 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  interacts with  --  NAP1;2; NFA02; NFA2
59 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  has similar expression pattern (mutual information value=0.956369) with  --  rps15ae
60 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  has similar expression pattern (mutual information value=1.00433) with  --  AT5G61310
61 AT3G59810  --  has similar expression pattern (mutual information value=0.916568) with  --  AT2G45860  --  has similar expression pattern (mutual information value=0.907562) with  --  AT4G37090
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact