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Location:  Home > Details for node SYNC3
Type: Protein GRN ID: np10272 Name: SYNC3
Annotation: SYNC3 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein [EC:6.1.1.22]
Gene Locus: AT1G70980
Gene Expression (Affy ATH1 probeset): 262306_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)
3 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12
4 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670
5 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760
6 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120
7 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  AT3G25660
8 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  L-Aspartyl-tRNA(Asn)
9 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  GATB
10 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  tRNA(Asn)
11 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  L-Asparagine
12 SYNC3  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  ATNS2; NS2; SYNC2; SYNC2_ARATH
13 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  interacts with  --  ATFUS6; ATSK31; COP11; CSN1; EMB78; FUS6; SK31
14 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  interacts with  --  ATS4; COP14; COP8; CSN4; EMB134; FUS4; FUS8
15 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  interacts with  --  COP13; CSN3; FUS11
16 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  interacts with  --  ATCUL1
17 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  interacts with  --  ATCUL3; ATCUL3A; CUL3; CUL3A
18 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.886495) with  --  AT2G19270
19 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.974796) with  --  AT1G65220
20 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.887662) with  --  ATDSS1(I); DSS1(I)
21 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=1.08607) with  --  AT1G74250
22 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=1.16199) with  --  AT1G02330
23 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.983666) with  --  HAT3.1
24 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.878306) with  --  GTE01; GTE1; IMB1
25 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.911669) with  --  EIF4B1
26 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=1.08338) with  --  AT3G30380
27 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.841035) with  --  AT1G76860
28 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.847174) with  --  AT4G02030
29 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.801954) with  --  AT5G05210
30 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.864039) with  --  AT5G23920
31 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.842626) with  --  AT5G53570
32 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.970306) with  --  AT1G31870
33 SYNC3  --  has similar expression pattern (mutual information value=0.872078) with  --  ATCSN2; COP12; CSN2; FUS12  --  has similar expression pattern (mutual information value=0.958887) with  --  AT5G20600
34 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.828935) with  --  AT2G18740
35 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.89318) with  --  AT2G21290
36 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.903949) with  --  AT2G25210
37 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.810898) with  --  AT3G03420
38 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.887249) with  --  AT4G03180
39 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT4G07950
40 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.897996) with  --  AT1G01210
41 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.82045) with  --  AT5G50310
42 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.907667) with  --  PNM1
43 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.963472) with  --  AT5G64670
44 SYNC3  --  has similar expression pattern (mutual information value=0.811771) with  --  AT2G25670  --  has similar expression pattern (mutual information value=0.910641) with  --  SDN3
45 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.939673) with  --  AT2G33840
46 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.939673) with  --  AT1G28350
47 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.835627) with  --  RIP3
48 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.923653) with  --  AT3G24080
49 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G58840
50 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.927914) with  --  NACA3
51 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.872898) with  --  PSL4
52 SYNC3  --  has similar expression pattern (mutual information value=1.09103) with  --  AT3G02760  --  has product (in catalytic reaction)  --  L-Histidyl-tRNA(His)
53 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17291) with  --  AT2G18520
54 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09590
55 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09690
56 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970564) with  --  AT1G09660
57 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.919329) with  --  AT1G79200
58 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.09412) with  --  AT2G31725
59 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.846316) with  --  AT1G06530
60 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C; RBP47C
61 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C'; RBP47C'
62 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.826851) with  --  AT1G63980
63 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17357) with  --  CDC48C; emb1354
64 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.05712) with  --  AT3G22660
65 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.887988) with  --  AT3G19360
66 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.882841) with  --  VIL1; VRN5
67 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.983348) with  --  AT3G66652
68 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.994594) with  --  AT3G12340
69 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.945101) with  --  AT4G01990
70 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22350
71 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22285
72 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.0424) with  --  AT4G22000
73 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.858052) with  --  AT4G22720
74 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.868392) with  --  AT4G25210
75 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.936556) with  --  AT4G39160
76 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.02914) with  --  AT3G51270
77 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.884001) with  --  AT3G60040
78 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.884001) with  --  AT3G60050
79 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.808972) with  --  AT5G06110
80 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.918353) with  --  AT5G11310
81 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.952332) with  --  ABO1; AtELP1; ELO2
82 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.987895) with  --  AT5G14440
83 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.90449) with  --  AT5G18950
84 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.06708) with  --  AT5G42060
85 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.834053) with  --  NRPC1
86 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.04059) with  --  AT5G61310
87 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.980502) with  --  AT5G04320
88 SYNC3  --  has similar expression pattern (mutual information value=1.01672) with  --  AT5G57120  --  interacts with  --  IMPA-2
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