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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G02400
Type: Protein GRN ID: np34490 Name:
Annotation: U3 ribonucleoprotein (Utp) family protein
Gene Locus: AT4G02400
Gene Expression (Affy ATH1 probeset): 255501_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280
3 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880
4 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160
5 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.912238) with  --  AT2G37990
6 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.872602) with  --  AT2G32220
7 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.964885) with  --  AT2G18220
8 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.874476) with  --  AT1G79150
9 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.896826) with  --  AT1G06720
10 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.904351) with  --  PPR596
11 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.97378) with  --  AAC42; ATRPAC42
12 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.898719) with  --  AT1G77550
13 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.936027) with  --  AT3G10530
14 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.926419) with  --  AT3G16080
15 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=1.00665) with  --  AT3G15080
16 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.87672) with  --  AT4G04940
17 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.96437) with  --  AT3G57000
18 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.887193) with  --  AT3G57490
19 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.908811) with  --  AT5G54910
20 AT4G02400  --  has similar expression pattern (mutual information value=0.896044) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.923102) with  --  AT5G62440
21 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.919876) with  --  AT2G18740
22 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.983001) with  --  PFD1
23 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.29902) with  --  AT2G32060
24 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.832317) with  --  RIP3
25 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.06026) with  --  AT2G20710
26 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.03422) with  --  AT1G23100
27 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.11481) with  --  AT1G08580
28 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.22574) with  --  AT1G09590
29 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.22574) with  --  AT1G09690
30 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.0022) with  --  ATPRMT10; PRMT10
31 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.20394) with  --  AT1G73940
32 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.985475) with  --  APC13; BNS
33 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.02863) with  --  AT3G05130
34 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.08865) with  --  AT3G12390
35 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.987164) with  --  AT4G10480
36 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.886683) with  --  AT4G30330
37 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.874883) with  --  AT3G51730
38 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.835228) with  --  AT5G50310
39 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=0.894667) with  --  PSL4
40 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.26728) with  --  PNM1
41 AT4G02400  --  has similar expression pattern (mutual information value=0.828658) with  --  AT1G64880  --  has similar expression pattern (mutual information value=1.45595) with  --  AT5G64670
42 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=1.01599) with  --  AT2G34357
43 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.819102) with  --  HEN2
44 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.978481) with  --  ATNAF1; NAF1
45 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.868947) with  --  NFD5
46 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.931631) with  --  AT3G22660
47 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.978158) with  --  AT4G25730
48 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.990235) with  --  NRPA1
49 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.920189) with  --  AT5G06110
50 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.842135) with  --  AT5G17930
51 AT4G02400  --  has similar expression pattern (mutual information value=1.01765) with  --  AT3G01160  --  has similar expression pattern (mutual information value=0.96791) with  --  SDN3
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