Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

No.	Path
2	HY5 -- is modified by -- ATCKA2; CKA2
3	HY5 -- interacts with -- AT3G56770
4	HY5 -- interacts with -- ATBZIP54; GBF2
5	HY5 -- interacts with -- AT5G21960
6	HY5 -- interacts with -- STH
7	HY5 -- interacts with -- PIF3
8	HY5 -- interacts with -- pil5
9	HY5 -- interacts with -- GBF1
10	HY5 -- interacts with -- HYH
11	HY5 -- interacts with -- AtBBX21; BBX21; LHUS; STH2
12	HY5 -- interacts with -- FAR1
13	HY5 -- interacts with -- FHY3
14	HY5 -- interacts with -- COP1
15	HY5 -- interacts with -- FIN219; JAR1
16	HY5 -- interacts with -- ATPEX2; PEX2; TED3
17	HY5 -- interacts with -- FBI1; HFR1; REP1; RSF1
18	HY5 -- interacts with -- CRF1
19	HY5 -- interacts with -- AT4G13040
20	HY5 -- interacts with -- MYC3
21	HY5 -- interacts with -- AtMYB18; MYB18
22	HY5 -- interacts with -- AT5G48560
23	HY5 -- interacts with -- AT3G23230
24	HY5 -- interacts with -- PYE
25	HY5 -- interacts with -- AT1G73870
26	HY5 -- interacts with -- BHLH101
27	HY5 -- interacts with -- AT5G57150
28	HY5 -- interacts with -- AT5G18450
29	HY5 -- interacts with -- BHLH039; ORG3
30	HY5 -- interacts with -- AtMYB79; MYB79
31	HY5 -- interacts with -- CES/CESTA
32	HY5 -- interacts with -- AT2G41130
33	HY5 -- interacts with -- RAP2.11
34	HY5 -- interacts with -- CHD3; CHR6; CKH2; GYM; PKL; SSL2
35	HY5 -- interacts with -- CIP8
36	HY5 -- regulates the expression of -- ATGA2OX2
37	HY5 -- regulates the expression of -- BBX22; DBB3; LZF1; STH3
38	HY5 -- regulates the expression of -- ANS; LDOX; TDS4; TT18
39	HY5 -- regulates the expression of -- DFR; M318; TT3
40	HY5 -- regulates the expression of -- CYP75B1; D501; TT7
41	HY5 -- regulates the expression of -- CHI
42	HY5 -- regulates the expression of -- ATCHS; CHS; TT4
43	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1
44	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2
45	HY5 -- regulates the expression of -- IAA14
46	HY5 -- regulates the expression of -- AXR2
47	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene
48	HY5 -- regulates the expression of -- ATERF11
49	HY5 -- regulates the expression of -- FHL
50	HY5 -- regulates the expression of -- F3'H; F3H; TT6
51	HY5 -- regulates the expression of -- FHY1; FRY1; PAT3
52	HY5 -- regulates the expression of -- ABI5
53	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3
54	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1
55	HY5 -- is regulated by -- SPA1
56	HY5 -- is modified by -- ATCKA2; CKA2 -- interacts with -- AT3G03773
57	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- EIF4B2
58	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- EIF4B1
59	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- ATEIF2-A2; EIF2 ALPHA; EIF2-A2
60	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- ATELF5A-1; EIF-5A; EIF5A; ELF5A-1
61	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
62	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- CKB3
63	HY5 -- is modified by -- ATCKA2; CKA2 -- modify -- ATSIG6; SIG6; SIGF; SOLDAT8
64	HY5 -- interacts with -- ATBZIP54; GBF2 -- interacts with -- GBF4
65	HY5 -- interacts with -- ATBZIP54; GBF2 -- has similar expression pattern (mutual information value=0.815137) with -- ARI5; ATARI5
66	HY5 -- interacts with -- PIF3 -- regulates the expression of -- BES1
67	HY5 -- interacts with -- PIF3 -- regulates the expression of -- RBCS1A
68	HY5 -- interacts with -- PIF3 -- is regulated by -- della family, transcription factor gene
69	HY5 -- interacts with -- PIF3 -- interacts with -- ATHDA15; HDA15
70	HY5 -- interacts with -- PIF3 -- interacts with -- PIF4
71	HY5 -- interacts with -- PIF3 -- interacts with -- RGL3
72	HY5 -- interacts with -- PIF3 -- interacts with -- RGL2
73	HY5 -- interacts with -- PIF3 -- interacts with -- RGL
74	HY5 -- interacts with -- PIF3 -- interacts with -- RGA1
75	HY5 -- interacts with -- PIF3 -- interacts with -- AT4G37710
76	HY5 -- interacts with -- PIF3 -- interacts with -- ATDET1; DET1; FUS2
77	HY5 -- interacts with -- PIF3 -- interacts with -- TCP2; TCP2
78	HY5 -- interacts with -- PIF3 -- interacts with -- PIF5; PIL6
79	HY5 -- interacts with -- PIF3 -- interacts with -- APRR1; AtTOC1; PRR1; TOC1
80	HY5 -- interacts with -- pil5 -- regulates the expression of -- TED4
81	HY5 -- interacts with -- pil5 -- regulates the expression of -- FeChII
82	HY5 -- interacts with -- pil5 -- regulates the expression of -- AS1 family97, transcription factor gene
83	HY5 -- interacts with -- pil5 -- regulates the expression of -- DAG1/PIL5
84	HY5 -- interacts with -- pil5 -- regulates the expression of -- ATGA3OX1 family94, coding gene
85	HY5 -- interacts with -- pil5 -- regulates the expression of -- psy
86	HY5 -- interacts with -- pil5 -- regulates the expression of -- ATFC-II; FC-II; FC2
87	HY5 -- interacts with -- pil5 -- regulates the expression of -- som
88	HY5 -- interacts with -- pil5 -- regulates the expression of -- PORC
89	HY5 -- interacts with -- pil5 -- interacts with -- phy family, coding gene
90	HY5 -- interacts with -- pil5 -- interacts with -- PIF7
91	HY5 -- interacts with -- pil5 -- interacts with -- PIF6; PIL2
92	HY5 -- interacts with -- GBF1 -- interacts with -- ATGLK2; GLK2; GPRI2
93	HY5 -- interacts with -- GBF1 -- interacts with -- ATGLK1; GLK1; GPRI1
94	HY5 -- interacts with -- GBF1 -- interacts with -- GIP1
95	HY5 -- interacts with -- GBF1 -- interacts with -- AtbZIP16; bZIP16
96	HY5 -- interacts with -- GBF1 -- regulates the expression of -- LFY
97	HY5 -- interacts with -- GBF1 -- regulates the expression of -- CAT2
98	HY5 -- interacts with -- GBF1 -- is modified by -- CKB1
99	HY5 -- interacts with -- AtBBX21; BBX21; LHUS; STH2 -- interacts with -- AT5G47060
100	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.824221) with -- AT1G76170
101	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.02723) with -- ATSCC3; SCC3
102	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.97862) with -- ATIPT2
103	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.988999) with -- ATRPA1A; ATRPA70A; RPA1A; RPA70A
104	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.09587) with -- AT1G60900
105	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.09587) with -- AT1G60830
106	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.891472) with -- AT1G77170
107	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.891472) with -- AT1G77150
108	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.83654) with -- AT1G03280
109	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.895311) with -- AT2G24830
110	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.00287) with -- MBD10
111	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.92223) with -- DRT111
112	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.81451) with -- AT1G63490
113	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.967144) with -- ftsh10
114	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.898119) with -- AT1G72390
115	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.0378) with -- HUB2
116	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.13464) with -- UNE6
117	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.07523) with -- AT3G09360
118	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.12066) with -- CHR11
119	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.898183) with -- ATPRP40C; PRP40C
120	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.05566) with -- LWD2
121	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.881645) with -- AT3G18380
122	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.20397) with -- AT3G19630
123	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.919068) with -- AT3G12140
124	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.946975) with -- NF-YC11
125	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.8536) with -- ATMBD8; MBD8
126	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.909859) with -- GTA02; GTA2
127	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.909859) with -- AT4G08360
128	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.92407) with -- AT4G12760
129	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.807114) with -- AT4G30820
130	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.07898) with -- GAUT3
131	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.917625) with -- AT3G46920
132	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.16047) with -- AT3G48120
133	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.900879) with -- ATFIP37; FIP37
134	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.863243) with -- AGL18
135	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.906784) with -- AT3G62080
136	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.89097) with -- AT5G06780
137	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.978651) with -- AT5G13970
138	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.908422) with -- AT5G14440
139	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.07997) with -- ATGSTT2; GST10B; GSTT2
140	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.07997) with -- ATGSTT3; GST10C; GSTT3
141	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.84946) with -- AT5G44150
142	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.896318) with -- emb1441
143	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.81121) with -- MEF1
144	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.0673) with -- AT5G53800
145	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.854363) with -- CPL4
146	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.00774) with -- AT5G25520
147	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.811072) with -- AT5G27460
148	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.05341) with -- AT5G15570
149	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.0806) with -- AT4G17620
150	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=0.821645) with -- AtMAPR4; MAPR4
151	HY5 -- interacts with -- FAR1 -- has similar expression pattern (mutual information value=1.13631) with -- SMU2
152	HY5 -- interacts with -- COP1 -- interacts with -- BIN4; MID
153	HY5 -- interacts with -- COP1 -- interacts with -- AT4G39070
154	HY5 -- interacts with -- COP1 -- interacts with -- ATRANGAP2; ATSCAR1; SCAR1; WAVE1
155	HY5 -- interacts with -- COP1 -- interacts with -- PHYE
156	HY5 -- interacts with -- COP1 -- interacts with -- PHYD
157	HY5 -- interacts with -- COP1 -- interacts with -- PHYC
158	HY5 -- interacts with -- COP1 -- interacts with -- ATCOL3; COL3
159	HY5 -- interacts with -- COP1 -- interacts with -- BBX24; STO
160	HY5 -- interacts with -- COP1 -- interacts with -- GI
161	HY5 -- interacts with -- COP1 -- interacts with -- ELF3; PYK20
162	HY5 -- interacts with -- COP1 -- interacts with -- CIP1
163	HY5 -- interacts with -- COP1 -- interacts with -- AT1G61620
164	HY5 -- interacts with -- COP1 -- interacts with -- UVR8
165	HY5 -- interacts with -- COP1 -- interacts with -- HRT; RCY1; RPP8
166	HY5 -- interacts with -- COP1 -- interacts with -- CIP7
167	HY5 -- interacts with -- COP1 -- interacts with -- CIP4
168	HY5 -- interacts with -- COP1 -- interacts with -- CIN4; COP10; EMB144; FUS9
169	HY5 -- interacts with -- COP1 -- interacts with -- ATTCP-1; TCP-1
170	HY5 -- interacts with -- FIN219; JAR1 -- interacts with -- CKR1/EIN2
171	HY5 -- interacts with -- ATPEX2; PEX2; TED3 -- interacts with -- DSK2
172	HY5 -- interacts with -- ATPEX2; PEX2; TED3 -- interacts with -- AT2G17190
173	HY5 -- interacts with -- FBI1; HFR1; REP1; RSF1 -- regulates the expression of -- PRE1
174	HY5 -- interacts with -- FBI1; HFR1; REP1; RSF1 -- interacts with -- CKB2
175	HY5 -- interacts with -- FBI1; HFR1; REP1; RSF1 -- interacts with -- KDR
176	HY5 -- interacts with -- CRF1 -- interacts with -- ARR12
177	HY5 -- interacts with -- CRF1 -- interacts with -- ARR7
178	HY5 -- interacts with -- CRF1 -- interacts with -- AHP5
179	HY5 -- interacts with -- CRF1 -- interacts with -- AHP4
180	HY5 -- interacts with -- CRF1 -- interacts with -- AHP3
181	HY5 -- interacts with -- CRF1 -- interacts with -- AHP2
182	HY5 -- interacts with -- CRF1 -- interacts with -- AHP1
183	HY5 -- interacts with -- CRF1 -- interacts with -- CRF7
184	HY5 -- interacts with -- CRF1 -- interacts with -- CRF8
185	HY5 -- interacts with -- CRF1 -- interacts with -- CRF6
186	HY5 -- interacts with -- CRF1 -- interacts with -- CRF5
187	HY5 -- interacts with -- CRF1 -- interacts with -- CRF4
188	HY5 -- interacts with -- CRF1 -- interacts with -- CRF3
189	HY5 -- interacts with -- CRF1 -- interacts with -- CRF2
190	HY5 -- interacts with -- CRF1 -- is a member of -- CRF1 family74, transcription factor gene
191	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ11
192	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ10
193	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ9
194	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ8
195	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ6
196	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ5
197	HY5 -- interacts with -- MYC3 -- interacts with -- JAI3
198	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ2
199	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ1
200	HY5 -- interacts with -- MYC3 -- interacts with -- EIL1
201	HY5 -- interacts with -- MYC3 -- interacts with -- ATMYB122; MYB122
202	HY5 -- interacts with -- MYC3 -- interacts with -- ATMYB34; ATR1; MYB34
203	HY5 -- interacts with -- MYC3 -- interacts with -- AtMYB28; HAG1; MYB28; PMG1
204	HY5 -- interacts with -- MYC3 -- interacts with -- ATMYB29; MYB29; PMG2
205	HY5 -- interacts with -- MYC3 -- interacts with -- AtMYB51; BW51A; BW51B; HIG1; MYB51
206	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ12
207	HY5 -- interacts with -- MYC3 -- interacts with -- JAZ7
208	HY5 -- interacts with -- AtMYB18; MYB18 -- is modified by -- MPK16
209	HY5 -- interacts with -- AT5G48560 -- interacts with -- CIB1
210	HY5 -- interacts with -- AT5G48560 -- interacts with -- IBH1
211	HY5 -- interacts with -- AT5G48560 -- has similar expression pattern (mutual information value=0.841066) with -- ATMYB38; BIT1; MYB38; RAX2
212	HY5 -- interacts with -- AT5G48560 -- has similar expression pattern (mutual information value=0.934223) with -- ATWRKY9; WRKY9
213	HY5 -- interacts with -- AT5G48560 -- has similar expression pattern (mutual information value=0.84206) with -- ATWRKY36; WRKY36
214	HY5 -- interacts with -- AT5G48560 -- has similar expression pattern (mutual information value=0.895721) with -- AT3G07000
215	HY5 -- interacts with -- AT5G48560 -- has similar expression pattern (mutual information value=0.884558) with -- ARLA1B; ATARLA1B
216	HY5 -- interacts with -- AT5G48560 -- is the target gene of -- ath-miR778
217	HY5 -- interacts with -- PYE -- interacts with -- bHLH104
218	HY5 -- interacts with -- PYE -- interacts with -- bHLH115
219	HY5 -- interacts with -- PYE -- interacts with -- bHLH105; ILR3
220	HY5 -- interacts with -- PYE -- interacts with -- AT5G51910
221	HY5 -- interacts with -- PYE -- interacts with -- AT5G65495
222	HY5 -- interacts with -- PYE -- interacts with -- AT4G17680
223	HY5 -- interacts with -- PYE -- interacts with -- AtTCP11; TCP11
224	HY5 -- interacts with -- PYE -- interacts with -- AT5G13810
225	HY5 -- interacts with -- PYE -- interacts with -- UNE12
226	HY5 -- interacts with -- PYE -- interacts with -- AT1G03040
227	HY5 -- interacts with -- PYE -- interacts with -- AtTCP15; TCP15
228	HY5 -- interacts with -- PYE -- interacts with -- AT2G19080
229	HY5 -- interacts with -- PYE -- is the target gene of -- ath-miR2937
230	HY5 -- interacts with -- AT1G73870 -- interacts with -- AT1G60010
231	HY5 -- interacts with -- BHLH101 -- interacts with -- ATBHLH029; ATBHLH29; ATFIT1; BHLH029; FIT1; FRU
232	HY5 -- interacts with -- CES/CESTA -- regulates the expression of -- CYP90A/CPD/CBB3
233	HY5 -- interacts with -- CES/CESTA -- interacts with -- BEE1
234	HY5 -- interacts with -- CES/CESTA -- is a member of -- BIN2 family18, transcription factor gene
235	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.90875) with -- ATMLO15; MLO15
236	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.830533) with -- LRX1
237	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.895245) with -- AtGH9C1; GH9C1
238	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.853991) with -- RHS12
239	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.866322) with -- AT3G49960
240	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.921177) with -- AT3G54580
241	HY5 -- interacts with -- RAP2.11 -- has similar expression pattern (mutual information value=0.921177) with -- ATHRGP1; HRGP1
242	HY5 -- interacts with -- CIP8 -- interacts with -- AT3G52155
243	HY5 -- regulates the expression of -- ATGA2OX2 -- has product (in catalytic reaction) -- Gibberellin A8
244	HY5 -- regulates the expression of -- ATGA2OX2 -- is a member of -- ATGA2OX2 family93, coding gene
245	HY5 -- regulates the expression of -- ATGA2OX2 -- is regulated by -- CBF1
246	HY5 -- regulates the expression of -- ANS; LDOX; TDS4; TT18 -- interacts with -- AT2G44130
247	HY5 -- regulates the expression of -- ANS; LDOX; TDS4; TT18 -- has product (in catalytic reaction) -- Taxifolin
248	HY5 -- regulates the expression of -- ANS; LDOX; TDS4; TT18 -- has product (in catalytic reaction) -- cis-Dihydroquercetin
249	HY5 -- regulates the expression of -- ANS; LDOX; TDS4; TT18 -- has similar expression pattern (mutual information value=0.88775) with -- ATGSTF12; GST26; GSTF12; TT19
250	HY5 -- regulates the expression of -- DFR; M318; TT3 -- interacts with -- ATFLS1; FLS; FLS1
251	HY5 -- regulates the expression of -- DFR; M318; TT3 -- has similar expression pattern (mutual information value=1.01583) with -- AT4G22870
252	HY5 -- regulates the expression of -- DFR; M318; TT3 -- has product (in catalytic reaction) -- (2S)-Flavanone
253	HY5 -- regulates the expression of -- DFR; M318; TT3 -- has product (in catalytic reaction) -- Dihydrokaempferol
254	HY5 -- regulates the expression of -- CYP75B1; D501; TT7 -- has product (in catalytic reaction) -- 3'-Hydroxyflavonoid
255	HY5 -- regulates the expression of -- CYP75B1; D501; TT7 -- is regulated by -- ATWRKY23; WRKY23
256	HY5 -- regulates the expression of -- CHI -- interacts with -- AAP5
257	HY5 -- regulates the expression of -- CHI -- is regulated by -- Family85, transcription factor gene
258	HY5 -- regulates the expression of -- CHI -- is regulated by -- ATTTG1; TTG; TTG1; URM23
259	HY5 -- regulates the expression of -- CHI -- is regulated by -- ATMYB75; MYB75; PAP1; SIAA1
260	HY5 -- regulates the expression of -- ATCHS; CHS; TT4 -- has similar expression pattern (mutual information value=0.971257) with -- 4CL3
261	HY5 -- regulates the expression of -- ATCHS; CHS; TT4 -- has similar expression pattern (mutual information value=1.07984) with -- AT5G05270
262	HY5 -- regulates the expression of -- ATCHS; CHS; TT4 -- has product (in catalytic reaction) -- Naringenin chalcone
263	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- AT1G27290
264	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- AT1G16170
265	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- AT1G25510
266	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- AT1G71140
267	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- ATKT2; ATKUP2; KT2; KUP2; SHY3; TRK2
268	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- CPUORF7
269	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- pad3
270	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- ATWNK8; EIP1; WNK8
271	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- ATCPK1; CPK1
272	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- interacts with -- CIPK23?
273	HY5 -- regulates the expression of -- ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1 -- transport -- Rubidium cation
274	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- AT5G38640
275	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- GF14 CHI; GRF1
276	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- GRF3; RCI1
277	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- 14-3-3OMEGA
278	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- GF14 PI; GRF13
279	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- ATSIZ1
280	HY5 -- regulates the expression of -- ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2 -- interacts with -- AtLOG3
281	HY5 -- regulates the expression of -- IAA14 -- regulates the expression of -- ASL18; LBD16
282	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF11
283	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF7
284	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF5
285	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA28
286	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA33
287	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA34
288	HY5 -- regulates the expression of -- IAA14 -- interacts with -- AXR3
289	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA19
290	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA26; PAP1
291	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA27; PAP2
292	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA13
293	HY5 -- regulates the expression of -- IAA14 -- interacts with -- BDL
294	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA9
295	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA8
296	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA3
297	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA2
298	HY5 -- regulates the expression of -- IAA14 -- interacts with -- AXR5
299	HY5 -- regulates the expression of -- IAA14 -- interacts with -- TIR1
300	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF8
301	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF6
302	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ARF4
303	HY5 -- regulates the expression of -- IAA14 -- interacts with -- IAA16
304	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ATAUX2-27; AUX2-27; IAA5
305	HY5 -- regulates the expression of -- IAA14 -- interacts with -- ATAUX2-11; IAA4
306	HY5 -- regulates the expression of -- IAA14 -- is a member of -- family38, transcription factor interactor and regulator gene
307	HY5 -- regulates the expression of -- IAA14 -- is a member of -- IAA3 family34, transcription factor interactor and regulator gene
308	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA18
309	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA20
310	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA32; MEE10
311	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA15
312	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA11
313	HY5 -- regulates the expression of -- AXR2 -- interacts with -- AFB3
314	HY5 -- regulates the expression of -- AXR2 -- interacts with -- AFB1
315	HY5 -- regulates the expression of -- AXR2 -- interacts with -- ATCUL1
316	HY5 -- regulates the expression of -- AXR2 -- interacts with -- TIR
317	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA30
318	HY5 -- regulates the expression of -- AXR2 -- interacts with -- ARF22
319	HY5 -- regulates the expression of -- AXR2 -- interacts with -- AFB5
320	HY5 -- regulates the expression of -- AXR2 -- interacts with -- AFB2
321	HY5 -- regulates the expression of -- AXR2 -- interacts with -- IAA10
322	HY5 -- regulates the expression of -- AXR2 -- interacts with -- TPR3
323	HY5 -- regulates the expression of -- AXR2 -- has similar expression pattern (mutual information value=0.888679) with -- PKS2
324	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has product (in catalytic reaction) -- GA9
325	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has product (in catalytic reaction) -- GA24
326	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has product (in catalytic reaction) -- GA15
327	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has family member -- ATGA20OX3
328	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has family member -- ATGA20OX4
329	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has family member -- atga20ox5
330	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has family member -- AtGA20ox2
331	HY5 -- regulates the expression of -- AtGA20ox1 family92, coding gene -- has family member -- AtGA20ox1/GA5
332	HY5 -- regulates the expression of -- ATERF11 -- regulates the expression of -- ACS5
333	HY5 -- regulates the expression of -- ATERF11 -- regulates the expression of -- ACS2
334	HY5 -- regulates the expression of -- ATERF11 -- is regulated by -- EIN3
335	HY5 -- regulates the expression of -- ATERF11 -- interacts with -- TPR1
336	HY5 -- regulates the expression of -- FHL -- interacts with -- Phytochrome A (PhyA)
337	HY5 -- regulates the expression of -- FHL -- interacts with -- AT2G37680
338	HY5 -- regulates the expression of -- F3'H; F3H; TT6 -- has product (in catalytic reaction) -- Dihydroflavonol
339	HY5 -- regulates the expression of -- FHY1; FRY1; PAT3 -- is the target gene of -- ath-miR5012
340	HY5 -- regulates the expression of -- ABI5 -- regulates the expression of -- ABI4
341	HY5 -- regulates the expression of -- ABI5 -- regulates the expression of -- ABF1 family47, transcription factor gene
342	HY5 -- regulates the expression of -- ABI5 -- regulates the expression of -- FLC
343	HY5 -- regulates the expression of -- ABI5 -- regulates the expression of -- ATEM6; EM6; GEA6
344	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- AtWRKY2
345	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- sdir1
346	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- AFP1
347	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- ABI3
348	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- SNRK2-3 family52, coding gene
349	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- ARR6
350	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- ARR5
351	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- ARR4
352	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- WRKY18
353	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- W-BOX
354	HY5 -- regulates the expression of -- ABI5 -- is regulated by -- ATWRKY60; WRKY60
355	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AHG3/pp2ca
356	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATCDPK2/CPK11
357	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ABF3
358	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ABF1
359	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AHG1
360	HY5 -- regulates the expression of -- ABI5 -- interacts with -- SNRK2-3
361	HY5 -- regulates the expression of -- ABI5 -- interacts with -- SNRK2-2
362	HY5 -- regulates the expression of -- ABI5 -- interacts with -- HAI1
363	HY5 -- regulates the expression of -- ABI5 -- interacts with -- COR27
364	HY5 -- regulates the expression of -- ABI5 -- interacts with -- CIR1; RVE2
365	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AO
366	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATCAD5; CAD-5; CAD5
367	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT4G23050
368	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT4G16670
369	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT3G48510
370	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AFP4; TMAC2
371	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AFP2
372	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT1G10585
373	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATBZIP12; DPBF4; EEL
374	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ACS10
375	HY5 -- regulates the expression of -- ABI5 -- interacts with -- DRB1
376	HY5 -- regulates the expression of -- ABI5 -- interacts with -- CCH/CHLH/GUN5
377	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATGSK1; ATSK2-3; ATSK22; BIL2; GSK1; SK22
378	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ASKdZeta
379	HY5 -- regulates the expression of -- ABI5 -- interacts with -- FCA
380	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AtMYB49; MYB49
381	HY5 -- regulates the expression of -- ABI5 -- interacts with -- SSP4
382	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ANAC072; RD26
383	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ABI1
384	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT4G25160
385	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATWNK2; WNK2; ZIK3
386	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AtCLO3; CLO-3; CLO3; RD20
387	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATPP2-B11; PP2-B11
388	HY5 -- regulates the expression of -- ABI5 -- interacts with -- anac032; NAC032
389	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AT1G76210
390	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ATPP2-A5; PP2-A5
391	HY5 -- regulates the expression of -- ABI5 -- interacts with -- ANAC019; NAC019
392	HY5 -- regulates the expression of -- ABI5 -- interacts with -- RAP2.4
393	HY5 -- regulates the expression of -- ABI5 -- interacts with -- DCAF1
394	HY5 -- regulates the expression of -- ABI5 -- interacts with -- TAP46
395	HY5 -- regulates the expression of -- ABI5 -- interacts with -- AtFYPP1; FYPP1
396	HY5 -- regulates the expression of -- ABI5 -- interacts with -- PFT1
397	HY5 -- regulates the expression of -- ABI5 -- interacts with -- KEG
398	HY5 -- regulates the expression of -- ABI5 -- is modified by -- AT5G21326
399	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.57889) with -- LHB1B1; LHCB1.4
400	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.57889) with -- LHB1B2; LHCB1.5
401	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.3336) with -- PSAG
402	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.35082) with -- LHCB2; LHCB2.1
403	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.35082) with -- LHCB2; LHCB2.2
404	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.41135) with -- LHCB4.2
405	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.23611) with -- PSAK
406	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=0.873558) with -- AT1G66940
407	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.30797) with -- PSAD-1
408	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.36386) with -- CAB4; LHCA4
409	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.41067) with -- AT5G28450
410	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.41067) with -- LHCA2
411	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=0.822801) with -- RLM3
412	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=1.19344) with -- RCA
413	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=0.834759) with -- ATPE
414	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- has similar expression pattern (mutual information value=0.833148) with -- PSBM
415	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- transport -- Zinc cation
416	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- is regulated by -- AtCCA1; CCA1
417	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- is regulated by -- ATMYC2
418	HY5 -- regulates the expression of -- AB140; CAB1; CAB140; LHCB1.3 -- is regulated by -- LHY; LHY1
419	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- interacts with -- NPQ4; PSBS
420	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- interacts with -- CAO; CPSRP43
421	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- interacts with -- ARR15
422	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- is regulated by -- AT5G01380
423	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- is modified by -- STN8
424	HY5 -- regulates the expression of -- AB165; CAB2; LHCB1.1 -- is modified by -- STN7
425	HY5 -- is regulated by -- SPA1 -- regulates the expression of -- FIP1
426	HY5 -- is regulated by -- SPA1 -- interacts with -- AT-PHH1; ATCRY2; CRY2; FHA; PHH1
427	HY5 -- is regulated by -- SPA1 -- interacts with -- Phytochrome B (PhyB)
428	HY5 -- is regulated by -- SPA1 -- interacts with -- ATCRY1; BLU1; CRY1; HY4; OOP2
429	HY5 -- is regulated by -- SPA1 -- interacts with -- SPA4
430	HY5 -- is regulated by -- SPA1 -- interacts with -- SPA3
431	HY5 -- is regulated by -- SPA1 -- interacts with -- SPA2
432	HY5 -- is regulated by -- SPA1 -- interacts with -- CO; FG
433	HY5 -- is regulated by -- SPA1 -- interacts with -- ATMYB90; MYB90; PAP2
434	HY5 -- is regulated by -- SPA1 -- interacts with -- DDB1B
435	HY5 -- is regulated by -- SPA1 -- interacts with -- DDB1A
436	HY5 -- is regulated by -- SPA1 -- is a member of -- COP1/SPA1 COMPLEX

Type: Protein	GRN ID: np03036	Name: HY5
Annotation:	HY5, TED 5 \| Basic-leucine zipper (bZIP) transcription factor family protein
Gene Locus:	AT5G11260
Transcription factor / transcriptional regulator:	transcription factor family bZIP
References:	Chen H, Zhang J, Neff MM, Hong SW, Zhang H, Deng XW, Xiong L. Integration of light and abscisic acid signaling during seed germination and early seedling development. Proc Natl Acad Sci U S A. 2008 Mar 18;105(11):4495-500. doi: 10.1073/pnas.0710778105. Epub 2008 Mar 10. PubMed PMID: 18332440; PubMed Central PMCID: PMC2393781.
Pathways:	Abscisic acid; Ethylene; Gibberellins; Jasmonates
Gene Expression (Affy ATH1 probeset):	250420_at

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

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