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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PSBM
Type: Protein GRN ID: np43355 Name: PSBM
Annotation: PSBM | photosystem II reaction center protein M
Gene Locus: ATCG00220
Gene Expression (Affy ATH1 probeset): 245001_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1
3 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB180; CAB3; LHCB1.2
4 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB140; CAB1; CAB140; LHCB1.3
5 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL
6 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC
7 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB
8 PSBM  --  has similar expression pattern (mutual information value=0.957566) with  --  PSAJ
9 PSBM  --  has similar expression pattern (mutual information value=0.905848) with  --  NDHI
10 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  NPQ4; PSBS
11 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  CAO; CPSRP43
12 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  interacts with  --  ARR15
13 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.57889) with  --  LHB1B1; LHCB1.4
14 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.57889) with  --  LHB1B2; LHCB1.5
15 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.3336) with  --  PSAG
16 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.35082) with  --  LHCB2; LHCB2.1
17 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.35082) with  --  LHCB2; LHCB2.2
18 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41135) with  --  LHCB4.2
19 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.23611) with  --  PSAK
20 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.873558) with  --  AT1G66940
21 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.30797) with  --  PSAD-1
22 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.36386) with  --  CAB4; LHCA4
23 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41067) with  --  AT5G28450
24 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.41067) with  --  LHCA2
25 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.822801) with  --  RLM3
26 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=1.19344) with  --  RCA
27 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  has similar expression pattern (mutual information value=0.834759) with  --  ATPE
28 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  transport  --  Zinc cation
29 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  is regulated by  --  HY5
30 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  is regulated by  --  AT5G01380
31 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  is modified by  --  STN8
32 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB165; CAB2; LHCB1.1  --  is modified by  --  STN7
33 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB180; CAB3; LHCB1.2  --  interacts with  --  CYO1; SCO2
34 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  AtCCA1; CCA1
35 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  ATMYC2
36 PSBM  --  has similar expression pattern (mutual information value=0.833148) with  --  AB140; CAB1; CAB140; LHCB1.3  --  is regulated by  --  LHY; LHY1
37 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=0.815) with  --  ACSF; CHL27; CRD1
38 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=1.22323) with  --  PSBJ
39 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=1.05553) with  --  YCF9
40 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=1.00251) with  --  PSBT; PSBTC
41 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=1.02252) with  --  ORF31
42 PSBM  --  has similar expression pattern (mutual information value=0.932308) with  --  PSBL  --  has similar expression pattern (mutual information value=0.843182) with  --  PSBF
43 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.937204) with  --  ATCSLB03; ATCSLB3; CSLB03
44 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.937204) with  --  ATCSLB04; ATCSLB4; CSLB04; CSLB04
45 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.897797) with  --  JAC1
46 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.832223) with  --  AT3G05350
47 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=1.0543) with  --  AT4G10060
48 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.87002) with  --  AT4G28080
49 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.813074) with  --  CLB6; HDR; ISPH
50 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.907102) with  --  AT3G48200
51 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.920804) with  --  ACA1; ATACA1; CAH1
52 PSBM  --  has similar expression pattern (mutual information value=0.969277) with  --  NDHC  --  has similar expression pattern (mutual information value=0.930035) with  --  pal3
53 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.00558) with  --  ATPA
54 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=0.862684) with  --  PSBI
55 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.09563) with  --  RPL23.2
56 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.09563) with  --  RPL23; RPL23.1
57 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.37766) with  --  PSBH
58 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.16341) with  --  NDHD
59 PSBM  --  has similar expression pattern (mutual information value=0.921098) with  --  PETB  --  has similar expression pattern (mutual information value=1.07529) with  --  RPL32
60 PSBM  --  has similar expression pattern (mutual information value=0.957566) with  --  PSAJ  --  has similar expression pattern (mutual information value=1.14337) with  --  YCF5
61 PSBM  --  has similar expression pattern (mutual information value=0.905848) with  --  NDHI  --  has similar expression pattern (mutual information value=1.23758) with  --  PETA
62 PSBM  --  has similar expression pattern (mutual information value=0.905848) with  --  NDHI  --  has similar expression pattern (mutual information value=1.37748) with  --  NDHA
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