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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G54580
Type: Protein GRN ID: np28820 Name:
Annotation: Proline-rich extensin-like family protein
Gene Locus: AT3G54580
Gene Expression (Affy ATH1 probeset): 251842_at    251843_x_at    265169_x_at    
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 Protein modification
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 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970
3 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15
4 AT3G54580  --  has similar expression pattern (mutual information value=0.925024) with  --  AT2G43150
5 AT3G54580  --  has similar expression pattern (mutual information value=1.10475) with  --  AT1G23720
6 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870
7 AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05240
8 AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05250
9 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630
10 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT2G24980
11 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
12 AT3G54580  --  has similar expression pattern (mutual information value=1.01044) with  --  AtGH9C1; GH9C1
13 AT3G54580  --  has similar expression pattern (mutual information value=0.979524) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
14 AT3G54580  --  has similar expression pattern (mutual information value=0.988407) with  --  RHS13
15 AT3G54580  --  has similar expression pattern (mutual information value=1.07929) with  --  AT4G13390
16 AT3G54580  --  has similar expression pattern (mutual information value=0.989588) with  --  ATXTH14; XTH14; XTR9
17 AT3G54580  --  has similar expression pattern (mutual information value=1.05155) with  --  AT4G26010
18 AT3G54580  --  has similar expression pattern (mutual information value=0.849496) with  --  LRX1
19 AT3G54580  --  has similar expression pattern (mutual information value=0.845497) with  --  AT3G28550
20 AT3G54580  --  has similar expression pattern (mutual information value=0.875869) with  --  ATHRGP1; HRGP1
21 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7
22 AT3G54580  --  has similar expression pattern (mutual information value=1.03089) with  --  ATEXT3; EXT3; RSH
23 AT3G54580  --  has similar expression pattern (mutual information value=0.878052) with  --  AT3G07900
24 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3
25 AT3G54580  --  has similar expression pattern (mutual information value=1.02004) with  --  AT5G04960
26 AT3G54580  --  has similar expression pattern (mutual information value=0.93301) with  --  COBL9; DER9; MRH4; SHV2
27 AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2
28 AT3G54580  --  has similar expression pattern (mutual information value=0.838708) with  --  LRL3
29 AT3G54580  --  has similar expression pattern (mutual information value=1.03754) with  --  RHS19
30 AT3G54580  --  has similar expression pattern (mutual information value=1.18215) with  --  AT5G35190
31 AT3G54580  --  has similar expression pattern (mutual information value=0.921177) with  --  RAP2.11
32 AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970  --  interacts with  --  AT4G13000
33 AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.852475) with  --  MRH6
34 AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.953158) with  --  ADF11
35 AT3G54580  --  has similar expression pattern (mutual information value=0.838266) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.859562) with  --  AT3G49960
36 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  interacts with  --  ATPEN3; PEN3
37 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  interacts with  --  AT3G18215
38 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  interacts with  --  ATSK42; SK42
39 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  interacts with  --  AMT1;2; ATAMT1;2
40 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.884701) with  --  AT2G34910
41 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.87029) with  --  RHS12
42 AT3G54580  --  has similar expression pattern (mutual information value=0.842003) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.835475) with  --  ADF8
43 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.807873) with  --  AT1G14960
44 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.925823) with  --  AT1G18980
45 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.87074) with  --  AHP1
46 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.94232) with  --  AT4G09990
47 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.826285) with  --  AT4G25090
48 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=1.31272) with  --  AT5G05500
49 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.958154) with  --  AT5G17820
50 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.975734) with  --  AT5G42510
51 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.975734) with  --  AT5G42500
52 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.830712) with  --  AT5G50560
53 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.830712) with  --  AT5G50660
54 AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870  --  has similar expression pattern (mutual information value=0.838239) with  --  AT2G47540
55 AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05240  --  has similar expression pattern (mutual information value=1.1447) with  --  ATPRP3; PRP3
56 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.85465) with  --  AT5G49080
57 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.85465) with  --  AT5G06640
58 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.85465) with  --  AT4G08400
59 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.85465) with  --  AT4G08410
60 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.807251) with  --  FLA6
61 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=1.04696) with  --  ATPRP1; PRP1; RHS7
62 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.983524) with  --  AGP3
63 AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630  --  has similar expression pattern (mutual information value=0.848952) with  --  CYCP4; CYCP4;2
64 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.968688) with  --  AT1G34510
65 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.00618) with  --  AT3G12540
66 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.858746) with  --  ATIRT2; IRT2
67 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.900023) with  --  AT4G22090
68 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.900023) with  --  RHS14
69 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.933219) with  --  AT4G30320
70 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=0.945529) with  --  AT5G24313
71 AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.04334) with  --  AtXTH12; XTH12
72 AT3G54580  --  has similar expression pattern (mutual information value=1.01044) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.845765) with  --  AT4G26220
73 AT3G54580  --  has similar expression pattern (mutual information value=0.988407) with  --  RHS13  --  has similar expression pattern (mutual information value=0.81723) with  --  COW1; SRH1
74 AT3G54580  --  has similar expression pattern (mutual information value=0.989588) with  --  ATXTH14; XTH14; XTR9  --  has similar expression pattern (mutual information value=0.809312) with  --  AT4G30670
75 AT3G54580  --  has similar expression pattern (mutual information value=1.05155) with  --  AT4G26010  --  has similar expression pattern (mutual information value=0.805781) with  --  AT4G22212
76 AT3G54580  --  has similar expression pattern (mutual information value=0.845497) with  --  AT3G28550  --  has similar expression pattern (mutual information value=0.854535) with  --  AT2G39040
77 AT3G54580  --  has similar expression pattern (mutual information value=0.845497) with  --  AT3G28550  --  has similar expression pattern (mutual information value=0.811804) with  --  LRX2
78 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.828978) with  --  ZIP3
79 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.80191) with  --  ATGH9A2; KOR2
80 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.821812) with  --  ATOCT6; OCT6
81 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.866028) with  --  BGLU35; TGG5
82 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.866028) with  --  BGLU34; TGG4
83 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.832882) with  --  AGL12; XAL1
84 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.82188) with  --  BGLU21
85 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.82188) with  --  BGLU22
86 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.917255) with  --  ATGSTU28; GSTU28
87 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.807142) with  --  AT3G26380
88 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.901019) with  --  CYP87A2
89 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.864653) with  --  ATMSRB8; MSRB8
90 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.864653) with  --  ATMSRB7; MSRB7
91 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.871341) with  --  AT5G14150
92 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.825984) with  --  NSH4
93 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.825984) with  --  NSH3
94 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  has similar expression pattern (mutual information value=0.912161) with  --  AT5G40510
95 AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7  --  interacts with  --  AT5G67130
96 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.824918) with  --  CRM3; HCF152
97 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.84895) with  --  LBD13
98 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.882741) with  --  AT4G28650
99 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.843837) with  --  AT4G35380
100 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.973576) with  --  AT3G54770
101 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.854233) with  --  AT5G01650
102 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.844443) with  --  AT5G38550
103 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.844443) with  --  AT5G38540
104 AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3  --  has similar expression pattern (mutual information value=0.820458) with  --  PFN3; PRF3
105 AT3G54580  --  has similar expression pattern (mutual information value=0.93301) with  --  COBL9; DER9; MRH4; SHV2  --  has similar expression pattern (mutual information value=0.840132) with  --  AT4G25790
106 AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2  --  interacts with  --  AT3G25805
107 AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2  --  has similar expression pattern (mutual information value=0.882692) with  --  AT2G39530
108 AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2  --  has similar expression pattern (mutual information value=0.972065) with  --  ATHB20; HB20
109 AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2  --  has similar expression pattern (mutual information value=0.877884) with  --  AT1G77330
110 AT3G54580  --  has similar expression pattern (mutual information value=0.838708) with  --  LRL3  --  interacts with  --  ATSWI3B?
111 AT3G54580  --  has similar expression pattern (mutual information value=1.03754) with  --  RHS19  --  has similar expression pattern (mutual information value=0.973925) with  --  RHS18
112 AT3G54580  --  has similar expression pattern (mutual information value=1.03754) with  --  RHS19  --  has similar expression pattern (mutual information value=1.10575) with  --  AtXTH13; XTH13
113 AT3G54580  --  has similar expression pattern (mutual information value=0.921177) with  --  RAP2.11  --  interacts with  --  HY5
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