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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PHYD
Type: Protein GRN ID: np32629 Name: PHYD
Annotation: PHYD | phytochrome D
Gene Locus: AT4G16250
Gene Expression (Affy ATH1 probeset): 245487_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PHYD  --  interacts with  --  Phytochrome B (PhyB)
3 PHYD  --  interacts with  --  PHYE
4 PHYD  --  interacts with  --  COP1
5 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIN7
6 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIN3
7 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATPIN1
8 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AtHB23; HB23
9 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AT2G26190
10 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AT1G74490
11 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AtDBP1; DBP1
12 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ADG1; APS1
13 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIL1
14 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  SPA1
15 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIF6; PIL2
16 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATVOZ2; VOZ2
17 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATVOZ1; VOZ1
18 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  GLT1; PGLCT
19 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ACBK1; ATCNGC10; CNGC10
20 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATERDJ2A
21 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ABCG10
22 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATGDU2; GDU2
23 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATCPK1; CPK1
24 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATCRY1; BLU1; CRY1; HY4; OOP2
25 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  pil5
26 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIF4
27 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2
28 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PKS1
29 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1
30 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ARR4
31 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIF3
32 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIF5; PIL6
33 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ELF3; PYK20
34 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  AT1G72390
35 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  HMR; PTAC12
36 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ATROPGEF11; PIRF1; ROPGEF11
37 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  IAA3
38 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PAPP2C
39 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  PIF7
40 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  interacts with  --  ADO1; FKL2; LKP1; ZTL
41 PHYD  --  interacts with  --  Phytochrome B (PhyB)  --  is a member of  --  phy family, coding gene
42 PHYD  --  interacts with  --  COP1  --  interacts with  --  BIN4; MID
43 PHYD  --  interacts with  --  COP1  --  interacts with  --  AT4G39070
44 PHYD  --  interacts with  --  COP1  --  interacts with  --  ATRANGAP2; ATSCAR1; SCAR1; WAVE1
45 PHYD  --  interacts with  --  COP1  --  interacts with  --  PHYC
46 PHYD  --  interacts with  --  COP1  --  interacts with  --  ATCOL3; COL3
47 PHYD  --  interacts with  --  COP1  --  interacts with  --  HYH
48 PHYD  --  interacts with  --  COP1  --  interacts with  --  BBX24; STO
49 PHYD  --  interacts with  --  COP1  --  interacts with  --  GI
50 PHYD  --  interacts with  --  COP1  --  interacts with  --  STH
51 PHYD  --  interacts with  --  COP1  --  interacts with  --  CO; FG
52 PHYD  --  interacts with  --  COP1  --  interacts with  --  CIP1
53 PHYD  --  interacts with  --  COP1  --  interacts with  --  AtMYB18; MYB18
54 PHYD  --  interacts with  --  COP1  --  interacts with  --  CIP8
55 PHYD  --  interacts with  --  COP1  --  interacts with  --  HY5
56 PHYD  --  interacts with  --  COP1  --  interacts with  --  Phytochrome A (PhyA)
57 PHYD  --  interacts with  --  COP1  --  interacts with  --  FBI1; HFR1; REP1; RSF1
58 PHYD  --  interacts with  --  COP1  --  interacts with  --  AT1G61620
59 PHYD  --  interacts with  --  COP1  --  interacts with  --  ATMYB90; MYB90; PAP2
60 PHYD  --  interacts with  --  COP1  --  interacts with  --  UVR8
61 PHYD  --  interacts with  --  COP1  --  interacts with  --  HRT; RCY1; RPP8
62 PHYD  --  interacts with  --  COP1  --  interacts with  --  FIN219; JAR1
63 PHYD  --  interacts with  --  COP1  --  interacts with  --  DDB1B
64 PHYD  --  interacts with  --  COP1  --  interacts with  --  DDB1A
65 PHYD  --  interacts with  --  COP1  --  interacts with  --  CIP7
66 PHYD  --  interacts with  --  COP1  --  interacts with  --  CIP4
67 PHYD  --  interacts with  --  COP1  --  interacts with  --  CIN4; COP10; EMB144; FUS9
68 PHYD  --  interacts with  --  COP1  --  interacts with  --  ATTCP-1; TCP-1
69 PHYD  --  interacts with  --  COP1  --  is a member of  --  COP1/SPA1 COMPLEX
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