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Location:  Home > Details for node AT5G48560
Type: Protein GRN ID: np39482 Name:
Annotation: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene Locus: AT5G48560
Transcription factor /
transcriptional regulator:		 transcription factor family bHLH
Gene Expression (Affy ATH1 probeset): 248708_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G48560  --  interacts with  --  HY5
3 AT5G48560  --  interacts with  --  CIB1
4 AT5G48560  --  interacts with  --  IBH1
5 AT5G48560  --  is the target gene of  --  ath-miR778
6 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2
7 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9
8 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36
9 AT5G48560  --  has similar expression pattern (mutual information value=0.895721) with  --  AT3G07000
10 AT5G48560  --  has similar expression pattern (mutual information value=0.884558) with  --  ARLA1B; ATARLA1B
11 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ATGA2OX2
12 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  BBX22; DBB3; LZF1; STH3
13 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ANS; LDOX; TDS4; TT18
14 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  DFR; M318; TT3
15 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  CYP75B1; D501; TT7
16 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  CHI
17 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ATCHS; CHS; TT4
18 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ATNRT1; B-1; CHL1; CHL1-1; NRT1; NRT1.1
19 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ATNR2; B29; CHL3; NIA2; NIA2-1; NR; NR2
20 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  IAA14
21 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  AXR2
22 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  AtGA20ox1 family92, coding gene
23 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ATERF11
24 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  FHL
25 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  F3'H; F3H; TT6
26 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  FHY1; FRY1; PAT3
27 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  ABI5
28 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  AB140; CAB1; CAB140; LHCB1.3
29 AT5G48560  --  interacts with  --  HY5  --  regulates the expression of   --  AB165; CAB2; LHCB1.1
30 AT5G48560  --  interacts with  --  HY5  --  is regulated by  --  SPA1
31 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT3G56770
32 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  ATBZIP54; GBF2
33 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT5G21960
34 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  STH
35 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  PIF3
36 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  pil5
37 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  GBF1
38 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  HYH
39 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AtBBX21; BBX21; LHUS; STH2
40 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  FAR1
41 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  FHY3
42 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  COP1
43 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  FIN219; JAR1
44 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  ATPEX2; PEX2; TED3
45 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  FBI1; HFR1; REP1; RSF1
46 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  CRF1
47 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT4G13040
48 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  MYC3
49 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AtMYB18; MYB18
50 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT3G23230
51 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  PYE
52 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT1G73870
53 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  BHLH101
54 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT5G57150
55 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT5G18450
56 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  BHLH039; ORG3
57 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AtMYB79; MYB79
58 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  CES/CESTA
59 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  AT2G41130
60 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  RAP2.11
61 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  CHD3; CHR6; CKH2; GYM; PKL; SSL2
62 AT5G48560  --  interacts with  --  HY5  --  interacts with  --  CIP8
63 AT5G48560  --  interacts with  --  HY5  --  is modified by  --  ATCKA2; CKA2
64 AT5G48560  --  interacts with  --  CIB1  --  interacts with  --  AT3G07340
65 AT5G48560  --  interacts with  --  CIB1  --  interacts with  --  CIB5
66 AT5G48560  --  interacts with  --  CIB1  --  interacts with  --  AT3G06590
67 AT5G48560  --  interacts with  --  CIB1  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1
68 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  ATNAP1;1; NAP1;1
69 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  BEE2
70 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  NAP1;3; NFA03; NFA3
71 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  BPE; BPEp; BPEub; ZCW32
72 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  ATBS1
73 AT5G48560  --  interacts with  --  IBH1  --  interacts with  --  AT2G18300
74 AT5G48560  --  is the target gene of  --  ath-miR778  --  inhibit the expression of  --  AT4G18250
75 AT5G48560  --  is the target gene of  --  ath-miR778  --  inhibit the expression of  --  SGD9; SUVH5
76 AT5G48560  --  is the target gene of  --  ath-miR778  --  inhibit the expression of  --  SDG23; SUVH6
77 AT5G48560  --  is the target gene of  --  ath-miR778  --  inhibit the expression of  --  ATFT1; ATFUT1; FT1; MUR2
78 AT5G48560  --  is the target gene of  --  ath-miR778  --  inhibit the expression of  --  AtkdsA1
79 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2  --  has similar expression pattern (mutual information value=0.851967) with  --  ATWRKY65; WRKY65
80 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2  --  has similar expression pattern (mutual information value=0.881338) with  --  AT2G43610
81 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2  --  has similar expression pattern (mutual information value=0.87644) with  --  AT4G35380
82 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2  --  has similar expression pattern (mutual information value=0.839939) with  --  AtMYB36; MYB36
83 AT5G48560  --  has similar expression pattern (mutual information value=0.841066) with  --  ATMYB38; BIT1; MYB38; RAX2  --  is the target gene of  --  ath-miR833a-5p
84 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=0.899532) with  --  AT2G44380
85 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=1.01039) with  --  CYP705A13
86 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=0.88864) with  --  CYP705A27
87 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=1.03767) with  --  GH3.17
88 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=0.862372) with  --  CYP706A7
89 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=0.947635) with  --  AT4G13130
90 AT5G48560  --  has similar expression pattern (mutual information value=0.934223) with  --  ATWRKY9; WRKY9  --  has similar expression pattern (mutual information value=0.958144) with  --  AT1G51850
91 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  PTF1; TCP13; TFPD
92 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT3G54390
93 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  ATWRKY60; WRKY60
94 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  ATGRX2; CXIP2
95 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT3G15160
96 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT4G01920
97 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT5G40660
98 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT1G56090
99 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  BRX
100 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  interacts with  --  AT1G64180
101 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.812304) with  --  AT2G44370
102 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.833868) with  --  HRS1
103 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=0.951275) with  --  AT5G43060
104 AT5G48560  --  has similar expression pattern (mutual information value=0.84206) with  --  ATWRKY36; WRKY36  --  has similar expression pattern (mutual information value=1.00592) with  --  AT5G53320
105 AT5G48560  --  has similar expression pattern (mutual information value=0.884558) with  --  ARLA1B; ATARLA1B  --  has similar expression pattern (mutual information value=0.979215) with  --  AT2G39530
106 AT5G48560  --  has similar expression pattern (mutual information value=0.884558) with  --  ARLA1B; ATARLA1B  --  has similar expression pattern (mutual information value=0.803094) with  --  ATRBOHB; ATRBOHB-BETA; RBOHB
107 AT5G48560  --  has similar expression pattern (mutual information value=0.884558) with  --  ARLA1B; ATARLA1B  --  has similar expression pattern (mutual information value=0.80478) with  --  AT3G19390
108 AT5G48560  --  has similar expression pattern (mutual information value=0.884558) with  --  ARLA1B; ATARLA1B  --  has similar expression pattern (mutual information value=0.829371) with  --  CBL6; SCABP2
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