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Location:  Home > Details for node CKB3
Type: Protein GRN ID: np26390 Name: CKB3
Annotation: CKB3 | casein kinase II beta chain 3
Gene Locus: AT3G60250
Gene Expression (Affy ATH1 probeset): 251411_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CKB3  --  interacts with  --  AtCCA1; CCA1
3 CKB3  --  interacts with  --  LHY; LHY1
4 CKB3  --  is the target gene of  --  ath-miR397b
5 CKB3  --  is the target gene of  --  ath-miR397a
6 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5
7 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2
8 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840
9 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  ATDET1; DET1; FUS2
10 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  CKB1
11 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  CKB2
12 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  SRT1
13 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  AT3G54500
14 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  AT5G64170
15 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  FHY3
16 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  AT2G37000
17 CKB3  --  interacts with  --  AtCCA1; CCA1  --  interacts with  --  TCP2; TCP2
18 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  BOA
19 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  AtTCP11; TCP11
20 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  APRR7; PRR7
21 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  APRR9; PRR9; TL1
22 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  AB140; CAB1; CAB140; LHCB1.3
23 CKB3  --  interacts with  --  AtCCA1; CCA1  --  regulates the expression of   --  ATCAT3; CAT3; SEN2
24 CKB3  --  interacts with  --  AtCCA1; CCA1  --  is regulated by  --  PIF3
25 CKB3  --  interacts with  --  AtCCA1; CCA1  --  is modified by  --  AT2G23080
26 CKB3  --  interacts with  --  LHY; LHY1  --  interacts with  --  AT5G53360
27 CKB3  --  interacts with  --  LHY; LHY1  --  regulates the expression of   --  APRR1; AtTOC1; PRR1; TOC1
28 CKB3  --  interacts with  --  LHY; LHY1  --  regulates the expression of   --  LUX; PCL1
29 CKB3  --  interacts with  --  LHY; LHY1  --  regulates the expression of   --  ATCCR2; CCR2
30 CKB3  --  is the target gene of  --  ath-miR397b  --  inhibit the expression of  --  ATLAC17; LAC17
31 CKB3  --  is the target gene of  --  ath-miR397b  --  inhibit the expression of  --  DPA
32 CKB3  --  is the target gene of  --  ath-miR397b  --  inhibit the expression of  --  ATG2484-1; G2484-1
33 CKB3  --  is the target gene of  --  ath-miR397b  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4
34 CKB3  --  is the target gene of  --  ath-miR397b  --  inhibit the expression of  --  ATLAC2; LAC2
35 CKB3  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  TBL14
36 CKB3  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  ATGLR2.5; GLR2.5
37 CKB3  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  AT4G33230
38 CKB3  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  AT3G06040
39 CKB3  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  CLPP3; NCLPP3
40 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.817501) with  --  ARF12
41 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=1.01325) with  --  AT2G01100
42 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.803252) with  --  AT1G02890
43 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=1.03765) with  --  ARI5; ATARI5
44 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.849331) with  --  ATBET10; BET10
45 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=1.02446) with  --  CHR11
46 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.888118) with  --  AT4G02480
47 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.89161) with  --  AT4G29380
48 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.811099) with  --  AT3G63500
49 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.953493) with  --  AT5G04240
50 CKB3  --  has similar expression pattern (mutual information value=0.892355) with  --  ATCDC5; ATMYBCDC5; CDC5  --  has similar expression pattern (mutual information value=0.974576) with  --  ATRCY1; RCY1
51 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  interacts with  --  AT3G03773
52 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  HY5
53 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  EIF4B2
54 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  EIF4B1
55 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  ATEIF2-A2; EIF2 ALPHA; EIF2-A2
56 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  ATELF5A-1; EIF-5A; EIF5A; ELF5A-1
57 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  pil5
58 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
59 CKB3  --  has similar expression pattern (mutual information value=0.806646) with  --  ATCKA2; CKA2  --  modify  --  ATSIG6; SIG6; SIGF; SOLDAT8
60 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
61 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  interacts with  --  IMPA-2
62 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.804775) with  --  PSBW
63 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.824497) with  --  AT2G34620
64 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.805114) with  --  AT2G35330
65 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.875825) with  --  AT2G02160
66 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.864471) with  --  emb1220
67 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.864471) with  --  AT3G60610
68 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.921559) with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
69 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.859993) with  --  GAPA-2
70 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.904434) with  --  AT1G48950
71 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.802388) with  --  AT1G72390
72 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.815847) with  --  AT1G52220
73 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.880412) with  --  AT3G07220
74 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.880412) with  --  AT3G07260
75 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.866015) with  --  AT3G12640
76 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=1.01852) with  --  AT3G19630
77 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.808458) with  --  AT2G34040
78 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.939722) with  --  AT4G31880
79 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.911262) with  --  AT3G47610
80 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.813595) with  --  ACSF; CHL27; CRD1
81 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.920709) with  --  EMB2789; MOS7
82 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.906548) with  --  AT5G07360
83 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.837793) with  --  WIT1
84 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.918988) with  --  AT5G13560
85 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.812018) with  --  APE2; TPT
86 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.84149) with  --  AT5G47090
87 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.899475) with  --  AT5G49400
88 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.835189) with  --  AT5G49880
89 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.814637) with  --  AT5G59250
90 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.886075) with  --  AT4G17620
91 CKB3  --  has similar expression pattern (mutual information value=0.936373) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.804254) with  --  AT4G16980
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