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Location:  Home > Details for node AT3G06040
Type: Protein GRN ID: np24150 Name:
Annotation: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Gene Locus: AT3G06040
Gene Expression (Affy ATH1 probeset): 258466_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G06040  --  is the target gene of  --  ath-miR397a
3 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210
4 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1
5 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9
6 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  TBL14
7 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  ATLAC17; LAC17
8 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  ATGLR2.5; GLR2.5
9 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  AT4G33230
10 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  CKB3
11 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  ATLMCO4; IRX12; LAC4; LMCO4
12 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  ATLAC2; LAC2
13 AT3G06040  --  is the target gene of  --  ath-miR397a  --  inhibit the expression of  --  CLPP3; NCLPP3
14 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.04747) with  --  AT2G39390
15 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.903949) with  --  AT2G25670
16 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.861481) with  --  PFD1
17 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.02684) with  --  AT2G32060
18 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.13739) with  --  AT1G09590
19 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.13739) with  --  AT1G09690
20 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.829061) with  --  AT2G21290
21 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.07015) with  --  AT2G31725
22 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.05055) with  --  AT1G73940
23 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.11879) with  --  AT3G06700
24 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=0.844378) with  --  AT3G49100
25 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.05455) with  --  AT5G62440
26 AT3G06040  --  has similar expression pattern (mutual information value=1.01562) with  --  AT2G25210  --  has similar expression pattern (mutual information value=1.13449) with  --  AT5G64670
27 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  interacts with  --  AT5G13810
28 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=1.14093) with  --  AT1G60770
29 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=1.14003) with  --  ATPRMT10; PRMT10
30 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=1.00675) with  --  AT3G03960
31 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=1.04486) with  --  AT3G22660
32 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=0.928359) with  --  ATNAP1;1; NAP1;1
33 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=0.964972) with  --  AT4G27090
34 AT3G06040  --  has similar expression pattern (mutual information value=1.18563) with  --  NFD1  --  has similar expression pattern (mutual information value=1.1071) with  --  AT4G31810
35 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.881634) with  --  AT2G27730
36 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.896088) with  --  AT2G40765
37 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.901879) with  --  AT2G20710
38 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.15953) with  --  TIM13
39 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.41557) with  --  AT1G23100
40 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.1709) with  --  AT1G08580
41 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.916066) with  --  AT1G05205
42 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.05425) with  --  HTA8
43 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.26011) with  --  AT1G79390
44 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.923297) with  --  AT1G16000
45 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.00435) with  --  ATCB5-A; B5 #6; CB5-A
46 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.906177) with  --  AT1G17510
47 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.26585) with  --  AT2G43780
48 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.93364) with  --  PBG1
49 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.981074) with  --  AT3G07590
50 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.27148) with  --  AT3G10090
51 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.980023) with  --  AT3G06610
52 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.09982) with  --  TOM20-3
53 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.03765) with  --  AT3G18510
54 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.958728) with  --  AT3G12390
55 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.09867) with  --  AT1G16740
56 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.17324) with  --  AT4G23620
57 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.849264) with  --  AT4G26210
58 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.21104) with  --  AT3G52040
59 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.947707) with  --  AT3G57000
60 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.26907) with  --  AT3G59650
61 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.02801) with  --  SAD1
62 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.03754) with  --  GR-RBP3
63 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=1.14334) with  --  AT5G61310
64 AT3G06040  --  has similar expression pattern (mutual information value=1.06804) with  --  emb2474; TIM9  --  has similar expression pattern (mutual information value=0.890232) with  --  AT5G09270
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