Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G01640
Type: Protein GRN ID: np21470 Name:
Annotation: unknown protein; Has 51 Blast hits to 51 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Gene Locus: AT2G01640
Gene Expression (Affy ATH1 probeset): 265874_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B
3 AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420
4 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220
5 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  interacts with  --  GUT15
6 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  interacts with  --  AT2G18860
7 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2
8 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  interacts with  --  ATG8F
9 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  interacts with  --  EMB3137
10 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090
11 AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B  --  has similar expression pattern (mutual information value=0.891327) with  --  AT5G18770
12 AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2
13 AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360
14 AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.84085) with  --  AT5G13830
15 AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3
16 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.80915) with  --  EMB2217
17 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.84557) with  --  AT1G71430
18 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.886138) with  --  AT3G13150
19 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.875186) with  --  AT4G20020
20 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.860853) with  --  AT3G61100
21 AT2G01640  --  has similar expression pattern (mutual information value=0.848025) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.865772) with  --  AT5G15750
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact