Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATG8F
Type: Protein GRN ID: np31845 Name: ATG8F
Annotation: ATG8F | Ubiquitin-like superfamily protein [TCDB:3.A.5.8] [TCDB:3.A.9.1]
Gene Locus: AT4G16520
Gene Expression (Affy ATH1 probeset): 245391_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATG8F  --  interacts with  --  AT4G34660
3 ATG8F  --  interacts with  --  AtNBR1; NBR1
4 ATG8F  --  interacts with  --  AT5G40690
5 ATG8F  --  interacts with  --  AT5G07730
6 ATG8F  --  interacts with  --  AT4G00355
7 ATG8F  --  interacts with  --  APG7; ATAPG7; ATATG7; ATG7
8 ATG8F  --  interacts with  --  ATATG3; ATG3
9 ATG8F  --  interacts with  --  CDC48B
10 ATG8F  --  interacts with  --  AT2G35900
11 ATG8F  --  interacts with  --  AT2G46550
12 ATG8F  --  interacts with  --  AT4G15930
13 ATG8F  --  has similar expression pattern (mutual information value=0.828325) with  --  ARP8; ARP8; ATARP8
14 ATG8F  --  interacts with  --  AT4G34660  --  interacts with  --  AT5G11550
15 ATG8F  --  interacts with  --  AT4G34660  --  interacts with  --  AT1G20110
16 ATG8F  --  interacts with  --  AT4G34660  --  interacts with  --  ATATG6; AtBECLIN1; ATG6; BECLIN1
17 ATG8F  --  interacts with  --  AtNBR1; NBR1  --  interacts with  --  AT5G15080
18 ATG8F  --  interacts with  --  AtNBR1; NBR1  --  interacts with  --  ATCFIM-25; CFIM-25
19 ATG8F  --  interacts with  --  AtNBR1; NBR1  --  interacts with  --  AT1G55890
20 ATG8F  --  interacts with  --  AtNBR1; NBR1  --  interacts with  --  ATBAG4; BAG4
21 ATG8F  --  interacts with  --  AT5G40690  --  has similar expression pattern (mutual information value=0.875605) with  --  AT2G45220
22 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  BTI3; RTNLB4
23 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  PRA1.A1
24 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  ATRER1C1
25 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  AT3G02420
26 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  AT3G10260
27 ATG8F  --  interacts with  --  AT5G07730  --  interacts with  --  AT3G54120
28 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  ATS2; EMB1995; LPAT1
29 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  APE1
30 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT2G03140
31 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  ATLFNR1; FNR1
32 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT5G44020
33 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT1G52870
34 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT4G36530
35 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  NPQ4; PSBS
36 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT1G44920
37 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT1G04340
38 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  CAB4; LHCA4
39 ATG8F  --  interacts with  --  AT4G00355  --  interacts with  --  AT3G32930
40 ATG8F  --  interacts with  --  AT4G00355  --  has similar expression pattern (mutual information value=0.810545) with  --  AT2G33830
41 ATG8F  --  interacts with  --  AT4G00355  --  has similar expression pattern (mutual information value=0.836938) with  --  AT3G13470
42 ATG8F  --  interacts with  --  APG7; ATAPG7; ATATG7; ATG7  --  interacts with  --  AT5G43690
43 ATG8F  --  interacts with  --  CDC48B  --  interacts with  --  GUT15
44 ATG8F  --  interacts with  --  CDC48B  --  interacts with  --  AT2G18860
45 ATG8F  --  interacts with  --  CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2
46 ATG8F  --  interacts with  --  CDC48B  --  interacts with  --  EMB3137
47 ATG8F  --  interacts with  --  CDC48B  --  has similar expression pattern (mutual information value=0.823823) with  --  AT2G01640
48 ATG8F  --  interacts with  --  CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090
49 ATG8F  --  interacts with  --  CDC48B  --  has similar expression pattern (mutual information value=0.912596) with  --  AT5G12220
50 ATG8F  --  interacts with  --  CDC48B  --  has similar expression pattern (mutual information value=0.891327) with  --  AT5G18770
51 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  ATPPT2; PPT2
52 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT5G18150
53 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT5G51010
54 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  TOM20-4
55 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  ATCIPK14; ATSR1; CIPK14; PKS24; SnRK3.15; SR1
56 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AtMYB6; MYB6
57 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT1G54770
58 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT1G12650
59 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT2G45920
60 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  DRIP2
61 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  AT2G31040
62 ATG8F  --  interacts with  --  AT2G46550  --  interacts with  --  CIPK22; SnRK3.19
63 ATG8F  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=0.829748) with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1
64 ATG8F  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=0.831221) with  --  AT2G04690
65 ATG8F  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=1.01265) with  --  AT3G47160
66 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT4G36970
67 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT5G14140
68 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT5G59790
69 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  EMB2789; MOS7
70 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  ASG4
71 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT1G28135
72 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT4G02425
73 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT2G24550
74 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT3G01400
75 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  AT2G26210
76 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  GATB
77 ATG8F  --  interacts with  --  AT4G15930  --  interacts with  --  RRA2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact